RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TNKS2Q9H2K2 1166 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 CATSPERBQ9H7T0 1116 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 IL21RQ9HBE5 538 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 TM7SF3Q9NS93 570 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 TRIM10Q9UDY6 481 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 CNOT8Q9UFF9 292 aaKnown RBP13.44□□□□□ -0.26
ERCC3-209ENST00000494464 ANGPTL2Q9UKU9 493 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 HPCAL4Q9UM19 191 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 GUCA1BQ9UMX6 200 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 DMTF1Q9Y222 760 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 FNDC3AQ9Y2H6 1198 aaKnown RBP13.44□□□□□ -0.26
ERCC3-209ENST00000494464 SNX11Q9Y5W9 270 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 WASF2Q9Y6W5 498 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 TBC1D3DA0A087WVF3 549 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 TBC1D3IA0A087WXS9 549 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 TBC1D3EA0A087X179 549 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 TBC1D3KA0A087X1G2 549 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 TBC1D3FA6NER0 549 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-209ENST00000494464 BTNL10A8MVZ5 291 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 TBC1D3LB9A6J9 549 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 KPNA3O00505 521 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-209ENST00000494464 CREB3O43889 395 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 TBC1D3HP0C7X1 549 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 CD38P28907 300 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 CCNHP51946 323 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-209ENST00000494464 YBEYP58557 167 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-209ENST00000494464 TAS2R38P59533 333 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 POLD3Q15054 466 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-209ENST00000494464 ZNF423Q2M1K9 1284 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 POM121L1PQ3SYA9 428 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 PARP15Q460N3 678 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 TBC1D3GQ6DHY5 549 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 TBC1D3CQ6IPX1 549 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 NAPEPLDQ6IQ20 393 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 NEK5Q6P3R8 708 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 LAYNQ6UX15 382 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 DBX2Q6ZNG2 339 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 PRPF39Q86UA1 669 aaKnown RBP13.43□□□□□ -0.26
ERCC3-209ENST00000494464 TBC1D3Q8IZP1 549 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-209ENST00000494464 RNF10Q8N5U6 811 aaKnown RBP13.43□□□□□ -0.26
ERCC3-209ENST00000494464 TRIM58Q8NG06 486 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 GRIN3AQ8TCU5 1115 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 ARRDC3Q96B67 414 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 SKA1Q96BD8 255 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 NCAPGQ9BPX3 1015 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 HEPHQ9BQS7 1158 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 HDAC8Q9BY41 377 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 NOL6Q9H6R4 1146 aaKnown RBP13.43□□□□□ -0.26
ERCC3-209ENST00000494464 MRPL47Q9HD33 250 aaKnown RBP13.43□□□□□ -0.26
ERCC3-209ENST00000494464 DYRK4Q9NR20 520 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 DONSONQ9NYP3 566 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 AP4E1Q9UPM8 1137 aa13.43□□□□□ -0.26
ERCC3-209ENST00000494464 FCF1Q9Y324 198 aaKnown RBP13.43□□□□□ -0.26
ERCC3-209ENST00000494464 PCNX2A6NKB5 2137 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 A0A087X0T9 212 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 A0A1W2PR77 199 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 FLRT2O43155 660 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 KDELR3O43731 214 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 SH3BP5O60239 455 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 DFNA5O60443 496 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 LEFTY1O75610 366 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 RNF8O76064 485 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 GSRP00390 522 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 FAM228BP0C875 321 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 ITGB7P26010 798 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 CCT8P50990 548 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 C21orf59P57076 290 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 TPI1P60174 286 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 SETMARQ53H47 684 aaPredicted RBP13.42□□□□□ -0.26
ERCC3-209ENST00000494464 CARD16Q5EG05 197 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 ARSIQ5FYB1 569 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 CYP4V2Q6ZWL3 525 aaPredicted RBP13.42□□□□□ -0.26
ERCC3-209ENST00000494464 ERN2Q76MJ5 926 aaKnown RBP13.42□□□□□ -0.26
ERCC3-209ENST00000494464 DNAAF5Q86Y56 855 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 PSTKQ8IV42 348 aaKnown RBP13.42□□□□□ -0.26
ERCC3-209ENST00000494464 UMODL1-AS1Q8N2C9 162 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 ARFGAP1Q8N6T3 406 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 BAHD1Q8TBE0 780 aaPredicted RBP13.42□□□□□ -0.26
ERCC3-209ENST00000494464 CASKIN2Q8WXE0 1202 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 LRIG1Q96JA1 1093 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 SERAC1Q96JX3 654 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 PEBP4Q96S96 227 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 SNRNP25Q9BV90 132 aaKnown RBP13.42□□□□□ -0.26
ERCC3-209ENST00000494464 AASDHPPTQ9NRN7 309 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 CDC23Q9UJX2 597 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 INTUQ9ULD6 942 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 WASF3Q9UPY6 502 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 ACTL7AQ9Y615 435 aa13.42□□□□□ -0.26
ERCC3-209ENST00000494464 COL5A1P20908 1838 aaPredicted RBP13.41□□□□□ -0.26
ERCC3-209ENST00000494464 RNF103O00237 685 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 PCDHGA12O60330 932 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 CBFA2T3O75081 653 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 LRCH4O75427 683 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 WNT1P04628 370 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 NEK3P51956 506 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 ZNF135P52742 658 aaPredicted RBP13.41□□□□□ -0.26
ERCC3-209ENST00000494464 SNRPD1P62314 119 aaKnown RBP13.41□□□□□ -0.26
ERCC3-209ENST00000494464 SIM1P81133 766 aaPredicted RBP13.41□□□□□ -0.26
ERCC3-209ENST00000494464 ACAP1Q15027 740 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 WHAMMP3Q1A5X7 153 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms