RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 MLPHQ9BV36 600 aaPredicted RBP19.65■□□□□ 0.74
USP39-218ENST00000493829 ANKZF1Q9H8Y5 726 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 NOD2Q9HC29 1040 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 HAUS2Q9NVX0 235 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 EVLQ9UI08 416 aaPredicted RBP19.65■□□□□ 0.74
USP39-218ENST00000493829 MYO18AQ92614 2054 aaKnown RBP19.64■□□□□ 0.73
USP39-218ENST00000493829 PMPCBO75439 489 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 IGSF6O95976 241 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 APRTP07741 180 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 DRD1P21728 446 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 OLIG2Q13516 323 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 SPARCL1Q14515 664 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 PRPSAP1Q14558 356 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 ANKRD22Q5VYY1 191 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 ZNF852Q6ZMS4 543 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 KDELC2Q7Z4H8 507 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 METTL3Q86U44 580 aaKnown RBP19.64■□□□□ 0.73
USP39-218ENST00000493829 ARRDC2Q8TBH0 407 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 FRS2Q8WU20 508 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 IFT81Q8WYA0 676 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 LRRC45Q96CN5 670 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 CEP44Q9C0F1 390 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 SLC25A51Q9H1U9 297 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 THAP10Q9P2Z0 257 aaPredicted RBP19.64■□□□□ 0.73
USP39-218ENST00000493829 SLC8A2Q9UPR5 921 aa19.64■□□□□ 0.73
USP39-218ENST00000493829 TCRBV7S3A2A0A539 114 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 GOLGA8MH3BSY2 632 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 DNALI1O14645 258 aaPredicted RBP19.63■□□□□ 0.73
USP39-218ENST00000493829 MMP2P08253 660 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 IVDP26440 423 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 FDFT1P37268 417 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 HSPA9P38646 679 aaKnown RBP19.63■□□□□ 0.73
USP39-218ENST00000493829 KIR2DL1P43626 348 aaPredicted RBP19.63■□□□□ 0.73
USP39-218ENST00000493829 IHHQ14623 411 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 ELF2Q15723 593 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 PCDH20Q8N6Y1 951 aaKnown RBP19.63■□□□□ 0.73
USP39-218ENST00000493829 PDCD7Q8N8D1 485 aaKnown RBP19.63■□□□□ 0.73
USP39-218ENST00000493829 IPMKQ8NFU5 416 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 OR2AP1Q8NGE2 309 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 GRIN3AQ8TCU5 1115 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 CPT1BQ92523 772 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 IMP4Q96G21 291 aaKnown RBP19.63■□□□□ 0.73
USP39-218ENST00000493829 NSMCE3Q96MG7 304 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 FCRL5Q96RD9 977 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 ZDHHC6Q9H6R6 413 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 STON1Q9Y6Q2 735 aa19.63■□□□□ 0.73
USP39-218ENST00000493829 MAN2B1O00754 1011 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 RNF40O75150 1001 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 SEC31AO94979 1220 aaKnown RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 PIGNO95427 931 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 EPHX1P07099 455 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 CR2P20023 1033 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 RECQLP46063 649 aaPredicted RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 CCNHP51946 323 aaPredicted RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 ITGA8P53708 1063 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 SNRPD1P62314 119 aaKnown RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 MTM1Q13496 603 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 SEMA5AQ13591 1074 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 UBXN2BQ14CS0 331 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 CARD16Q5EG05 197 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 TJAP1Q5JTD0 557 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 C4orf22Q6V702 233 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 DPY19L3Q6ZPD9 716 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 SRLQ86TD4 932 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 PRPF39Q86UA1 669 aaKnown RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 GSPT2Q8IYD1 628 aaKnown RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 UBALD2Q8IYN6 164 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 CHST14Q8NCH0 376 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 NUDCD1Q96RS6 583 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 APOL2Q9BQE5 337 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 FOXQ1Q9C009 403 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 GRHL1Q9NZI5 618 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 HECAQ9UBI9 543 aaPredicted RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 WNT16Q9UBV4 365 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 TPX2Q9ULW0 747 aaKnown RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 CXorf51AA0A1B0GTR3 108 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 USP12O75317 370 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 TMEM63AO94886 807 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 KLF8O95600 359 aaPredicted RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 GSRP00390 522 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 SKOR1P84550 965 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 PRKCQQ04759 706 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 CALCOCO2Q13137 446 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 RNASEH2BQ5TBB1 312 aaKnown RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 OR2A12Q8NGT7 310 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 ISG20Q96AZ6 181 aaKnown RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 TMEM245Q9H330 911 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 PIH1D1Q9NWS0 290 aaKnown RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 STARD13Q9Y3M8 1113 aa19.62■□□□□ 0.73
USP39-218ENST00000493829 MTF2Q9Y483 593 aaPredicted RBP19.62■□□□□ 0.73
USP39-218ENST00000493829 TRIOO75962 3097 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 SIN3BO75182 1162 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 TARSP26639 723 aaKnown RBP19.61■□□□□ 0.73
USP39-218ENST00000493829 CCINQ13939 588 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 HLTFQ14527 1009 aaKnown RBP eCLIP19.61■□□□□ 0.73
USP39-218ENST00000493829 KCNJ11Q14654 390 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 HNRNPA1L2Q32P51 320 aaKnown RBP19.61■□□□□ 0.73
USP39-218ENST00000493829 ALG1LQ6GMV1 187 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 Q6ZS52 159 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms