RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 CCNHP51946 323 aaPredicted RBP11.21□□□□□ -0.61
SND1-215ENST00000492772 THOP1P52888 689 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 PDX1P52945 283 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 SLC6A3Q01959 620 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 SLC20A2Q08357 652 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 EIF3IQ13347 325 aaKnown RBP11.21□□□□□ -0.61
SND1-215ENST00000492772 PTK2BQ14289 1009 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 ARL13BQ3SXY8 428 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 PERM1Q5SV97 790 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 OTUD1Q5VV17 481 aaPredicted RBP11.21□□□□□ -0.61
SND1-215ENST00000492772 KLHL10Q6JEL2 608 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 CRTC1Q6UUV9 634 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 XKR5Q6UX68 686 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 PARS2Q7L3T8 475 aaKnown RBP11.21□□□□□ -0.61
SND1-215ENST00000492772 TFAP2DQ7Z6R9 452 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 ZDHHC17Q8IUH5 632 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 PASD1Q8IV76 773 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 SLC35F3Q8IY50 421 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 PHACTR4Q8IZ21 702 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 NELFBQ8WX92 580 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 ARHGEF26Q96DR7 871 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 TIGD1Q96MW7 591 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 KLF6Q99612 283 aaPredicted RBP11.21□□□□□ -0.61
SND1-215ENST00000492772 C1QTNF2Q9BXJ5 285 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 WDCPQ9H6R7 721 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 SYNCQ9H7C4 482 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 SYNDIG1Q9H7V2 258 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 GDPD2Q9HCC8 539 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 KLF15Q9UIH9 416 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 PCDHGA7Q9Y5G6 932 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 BOD1L1Q8NFC6 3051 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 KIF26BQ2KJY2 2108 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 IGLV3-10A0A075B6K4 115 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 CXorf51AA0A1B0GTR3 108 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 PMS2P1A4D2B8 440 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 BECN2A8MW95 431 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 LMO7DNF2Z398 122 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 TMX2-CTNND1H3BSU7 103 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 NEMP1O14524 444 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 SPINT1O43278 529 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 ZNF821O75541 412 aaPredicted RBP11.2□□□□□ -0.62
SND1-215ENST00000492772 ENDOD1O94919 500 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 F9P00740 461 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 ERBB2P04626 1255 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 ANXA6P08133 673 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 USP8P40818 1118 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 SULT1E1P49888 294 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 DNA2P51530 1060 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 PFN3P60673 137 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 EIF2B5Q13144 721 aaKnown RBP11.2□□□□□ -0.62
SND1-215ENST00000492772 DRAP1Q14919 205 aaPredicted RBP11.2□□□□□ -0.62
SND1-215ENST00000492772 CARD16Q5EG05 197 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 PRRT3Q5FWE3 981 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 TPRG1LQ5T0D9 272 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 ESRP1Q6NXG1 681 aaKnown RBP11.2□□□□□ -0.62
SND1-215ENST00000492772 TRIM65Q6PJ69 517 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 RBFAQ8N0V3 343 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 WDTC1Q8N5D0 677 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 C1orf131Q8NDD1 294 aaKnown RBP11.2□□□□□ -0.62
SND1-215ENST00000492772 OR7D4Q8NG98 312 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 PGAP3Q96FM1 320 aaPredicted RBP11.2□□□□□ -0.62
SND1-215ENST00000492772 C1orf74Q96LT6 269 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 NPY6RQ99463 290 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 CCDC3Q9BQI4 270 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 LRRC61Q9BV99 259 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 SLC13A1Q9BZW2 595 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 ZDHHC6Q9H6R6 413 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 ATP13A1Q9HD20 1204 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.2□□□□□ -0.629e-6■□□□□ 9.2
SND1-215ENST00000492772 MPP6Q9NZW5 540 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 CTNND2Q9UQB3 1225 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 PTPN13Q12923 2485 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 RP1P56715 2156 aa11.2□□□□□ -0.62
SND1-215ENST00000492772 IGLON5A6NGN9 336 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 I6L893 689 aaPredicted RBP11.19□□□□□ -0.62
SND1-215ENST00000492772 TOR1BO14657 336 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 PLD2O14939 933 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 ZMPSTE24O75844 475 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 GJB6O95452 261 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 ITGB2P05107 769 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 ETFBP38117 255 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 ABL2P42684 1182 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 ADKP55263 362 aaKnown RBP11.19□□□□□ -0.62
SND1-215ENST00000492772 GEMIN4P57678 1058 aaKnown RBP11.19□□□□□ -0.62
SND1-215ENST00000492772 YPEL5P62699 121 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 PTK2Q05397 1052 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 DEUP1Q05D60 604 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 NFATC3Q12968 1075 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 ARHGAP44Q17R89 818 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 PTPN20Q4JDL3 420 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 MACC1Q6ZN28 852 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 PLPP6Q8IY26 295 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 FSTL5Q8N475 847 aaPredicted RBP11.19□□□□□ -0.62
SND1-215ENST00000492772 ARL10Q8N8L6 244 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 SHC3Q92529 594 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 NT5C3BQ969T7 300 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 ISG20Q96AZ6 181 aaKnown RBP11.19□□□□□ -0.62
SND1-215ENST00000492772 SPON2Q9BUD6 331 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 C1QTNF7Q9BXJ2 289 aa11.19□□□□□ -0.62
SND1-215ENST00000492772 ZYG11BQ9C0D3 744 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms