RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 VCPIP1Q96JH7 1222 aa13.45□□□□□ -0.26
HDAC3-213ENST00000492506 HSFY1Q96LI6 401 aa13.45□□□□□ -0.26
HDAC3-213ENST00000492506 WDR24Q96S15 920 aa13.45□□□□□ -0.26
HDAC3-213ENST00000492506 PRMT1Q99873 361 aaKnown RBP13.45□□□□□ -0.26
HDAC3-213ENST00000492506 HPCAL4Q9UM19 191 aa13.45□□□□□ -0.26
HDAC3-213ENST00000492506 TLN1Q9Y490 2541 aaKnown RBP13.44□□□□□ -0.26
HDAC3-213ENST00000492506 K7ENP7 123 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 MCF2LO15068 1137 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 ATP9BO43861 1147 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 FBXO21O94952 628 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 WISP1O95388 367 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 IGLV3-25P01717 112 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 KRT10P13645 584 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 PDGFRAP16234 1089 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 PRLRP16471 622 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 NNMTP40261 264 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 YWHAEP62258 255 aaKnown RBP13.44□□□□□ -0.26
HDAC3-213ENST00000492506 SULT2A1Q06520 285 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 EIF4EBP2Q13542 120 aaPredicted RBP13.44□□□□□ -0.26
HDAC3-213ENST00000492506 ISXQ2M1V0 245 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 PIP5KL1Q5T9C9 394 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 FAM46CQ5VWP2 391 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 SPECC1LQ69YQ0 1117 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 INO80CQ6PI98 192 aaPredicted RBP13.44□□□□□ -0.26
HDAC3-213ENST00000492506 CIR1Q86X95 450 aaPredicted RBP13.44□□□□□ -0.26
HDAC3-213ENST00000492506 SLC22A18ASQ8N1D0 253 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 C1orf131Q8NDD1 294 aaKnown RBP13.44□□□□□ -0.26
HDAC3-213ENST00000492506 OR13H1Q8NG92 308 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 OR52K2Q8NGK3 314 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 CCHCR1Q8TD31 782 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 BCAS4Q8TDM0 211 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 OR8D1Q8WZ84 308 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 PRR11Q96HE9 360 aaPredicted RBP13.44□□□□□ -0.26
HDAC3-213ENST00000492506 NOX5Q96PH1 765 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 MYOCQ99972 504 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.44□□□□□ -0.26
HDAC3-213ENST00000492506 MIS12Q9H081 205 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 PREBQ9HCU5 417 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 KLC4Q9NSK0 619 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 NLGN3Q9NZ94 848 aa13.44□□□□□ -0.26
HDAC3-213ENST00000492506 FAM237AA0A1B0GTK4 181 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 M0QYV0 167 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 SCAMP1O15126 338 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 ALOX15BO15296 676 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 SLC31A1O15431 190 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 SYF2O95926 243 aaKnown RBP13.43□□□□□ -0.26
HDAC3-213ENST00000492506 TBXAS1P24557 533 aaPredicted RBP13.43□□□□□ -0.26
HDAC3-213ENST00000492506 CLNS1AP54105 237 aaKnown RBP13.43□□□□□ -0.26
HDAC3-213ENST00000492506 ZNF284Q2VY69 593 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 ZC3H12AQ5D1E8 599 aaKnown RBP13.43□□□□□ -0.26
HDAC3-213ENST00000492506 KIAA1614Q5VZ46 1190 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 ALS2CLQ60I27 953 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 TMEM270Q6UE05 265 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 BEND5Q7L4P6 421 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 DSG4Q86SJ6 1040 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 CHSY1Q86X52 802 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 KLK6Q92876 244 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 BTN2A3PQ96KV6 586 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 SLC46A1Q96NT5 459 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 OSBPL2Q9H1P3 480 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 GOLPH3LQ9H4A5 285 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 FZD3Q9NPG1 666 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 THSD1Q9NS62 852 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 TJP2Q9UDY2 1190 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 SATB2Q9UPW6 733 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 OR51B4Q9Y5P0 310 aa13.43□□□□□ -0.26
HDAC3-213ENST00000492506 SCN8AQ9UQD0 1980 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 A0A1W2PQU0 124 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 PMS2P1A4D2B8 440 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 K7ESM1 405 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 RNF103O00237 685 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 CETN3O15182 167 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 SLC28A2O43868 658 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 CTSLP07711 333 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 TGM2P21980 687 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 NDUFA8P51970 172 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 VSNL1P62760 191 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 PITX1P78337 314 aaPredicted RBP13.42□□□□□ -0.26
HDAC3-213ENST00000492506 ACTN3Q08043 901 aaPredicted RBP13.42□□□□□ -0.26
HDAC3-213ENST00000492506 DLG2Q15700 870 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 CCDC40Q4G0X9 1142 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 DCAF17Q5H9S7 520 aaPredicted RBP13.42□□□□□ -0.26
HDAC3-213ENST00000492506 C3orf38Q5JPI3 329 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 FBXW10Q5XX13 1052 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 NEK5Q6P3R8 708 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 GCNT7Q6ZNI0 430 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 Q6ZVU0 165 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 ABI3BPQ7Z7G0 1075 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 SMYD4Q8IYR2 804 aaPredicted RBP13.42□□□□□ -0.26
HDAC3-213ENST00000492506 EHBP1Q8NDI1 1231 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 IFI44Q8TCB0 444 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 KAT5Q92993 513 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 SLC35C1Q96A29 364 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 CCDC47Q96A33 483 aaKnown RBP13.42□□□□□ -0.26
HDAC3-213ENST00000492506 IFT43Q96FT9 208 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 ANKRD27Q96NW4 1050 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 FEM1AQ9BSK4 669 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 CALN1Q9BXU9 219 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 USP29Q9HBJ7 922 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 GPR27Q9NS67 375 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms