RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 CD248Q9HCU0 757 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 DNAJC28Q9NX36 388 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CORO1CQ9ULV4 474 aaPredicted RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 SLC12A4Q9UP95 1085 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 LOC100653049A0A140TA62 436 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 PIAS1O75925 651 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 KRT34O76011 436 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 CKBP12277 381 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 ENO3P13929 434 aaPredicted RBP7.43□□□□□ -1.22
NPHP3-208ENST00000490993 FOXN2P32314 431 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 PBX3P40426 434 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 OTOP3Q7RTS5 596 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 SLC41A1Q8IVJ1 513 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 ARFGAP1Q8N6T3 406 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 SEMA3CQ99985 751 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 CLPBQ9H078 707 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 MAGEH1Q9H213 219 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 ATXN3LQ9H3M9 355 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 RETREG1Q9H6L5 497 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 ELAC1Q9H777 363 aaKnown RBP7.43□□□□□ -1.22
NPHP3-208ENST00000490993 VCX3AQ9NNX9 186 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 FLRT1Q9NZU1 646 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 COPG2Q9UBF2 871 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 BAG5Q9UL15 447 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 NRP1O14786 923 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 CASQ2O14958 399 aaPredicted RBP7.43□□□□□ -1.22
NPHP3-208ENST00000490993 CHRNA1P02708 482 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 LAG3P18627 525 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 TACR2P21452 398 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 NUDT2P50583 147 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 CDH4P55283 916 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 INPP5AQ14642 412 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 XKR4Q5GH76 650 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 CEP70Q8NHQ1 597 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 SIGLEC10Q96LC7 697 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 C1orf74Q96LT6 269 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 TSGA13Q96PP4 275 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 EPB41L4BQ9H329 900 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 HIPK3Q9H422 1215 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.43□□□□□ -1.22
NPHP3-208ENST00000490993 ARIH1Q9Y4X5 557 aaPredicted RBP7.43□□□□□ -1.22
NPHP3-208ENST00000490993 PHGDHO43175 533 aaKnown RBP7.43□□□□□ -1.22
NPHP3-208ENST00000490993 ANP32DO95626 131 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 MAGEA6P43360 314 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 TM4SF4P48230 202 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 RCN1Q15293 331 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 BNC2Q6ZN30 1099 aaPredicted RBP7.43□□□□□ -1.22
NPHP3-208ENST00000490993 C10orf107Q8IVU9 208 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 APLFQ8IW19 511 aaPredicted RBP7.43□□□□□ -1.22
NPHP3-208ENST00000490993 PLCD3Q8N3E9 789 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 NKAPQ8N5F7 415 aaKnown RBP7.43□□□□□ -1.22
NPHP3-208ENST00000490993 FITM2Q8N6M3 262 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 KYQ8NBH2 561 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 ATAD1Q8NBU5 361 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 CCDC124Q96CT7 223 aaKnown RBP7.43□□□□□ -1.22
NPHP3-208ENST00000490993 CNDP1Q96KN2 507 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 ZNF599Q96NL3 588 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 C2orf49Q9BVC5 232 aaPredicted RBP7.43□□□□□ -1.22
NPHP3-208ENST00000490993 ZCWPW1Q9H0M4 648 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 POMKQ9H5K3 350 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 CASS4Q9NQ75 786 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 MKS1Q9NXB0 559 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 GABRQQ9UN88 632 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 FOXO6A8MYZ6 492 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 E9PBE3 544 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 H3BMM5 538 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 GOLGA8TH3BQL2 631 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 TYROBPO43914 113 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 KLHL41O60662 606 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 PLIN3O60664 434 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 DNAJC6O75061 913 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 IGSF6O95976 241 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 IL10P22301 178 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 NEK3P51956 506 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 DUSP4Q13115 394 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 DPYSQ14117 519 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 NUDT18Q6ZVK8 323 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 CLNKQ7Z7G1 428 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 MYO1HQ8N1T3 1032 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 SLC39A8Q9C0K1 460 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 KATNBL1Q9H079 304 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 CDH19Q9H159 772 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 AGO3Q9H9G7 860 aaKnown RBP7.43□□□□□ -1.22
NPHP3-208ENST00000490993 CHRAC1Q9NRG0 131 aa7.43□□□□□ -1.22
NPHP3-208ENST00000490993 M0QZQ0 153 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 DCLK1O15075 740 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 UBDO15205 165 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 ACSL4O60488 711 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 PIGNO95427 931 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 C2P06681 752 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 ZNF7P17097 686 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 ARMC12Q5T9G4 340 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 KIAA0930Q6ICG6 404 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 LRRC8EQ6NSJ5 796 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 NET1Q7Z628 596 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 CAND1Q86VP6 1230 aaKnown RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 DENND1CQ8IV53 801 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 SCAMP5Q8TAC9 235 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 RIN3Q8TB24 985 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 PXYLP1Q8TE99 480 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms