RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 MMGT1Q8N4V1 131 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 CCDC110Q8TBZ0 833 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 LRRN4Q8WUT4 740 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 IFT43Q96FT9 208 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 PPP1R16AQ96I34 528 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 LRIG1Q96JA1 1093 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 TUBGCP5Q96RT8 1024 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 SEMA3CQ99985 751 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 MGME1Q9BQP7 344 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 IER2Q9BTL4 223 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 OSBPL1AQ9BXW6 950 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 CEP41Q9BYV8 373 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 OSBPL6Q9BZF3 934 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 TM6SF2Q9BZW4 377 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 SLC25A51Q9H1U9 297 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 ATP13A3Q9H7F0 1226 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 GLOD4Q9HC38 313 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 LTB4R2Q9NPC1 389 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 DYRK4Q9NR20 520 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 RAB6BQ9NRW1 208 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 VPS45Q9NRW7 570 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 STON1Q9Y6Q2 735 aa11.11□□□□□ -0.63
VARS2-210ENST00000490699 EYSQ5T1H1 3165 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 ERI2A8K979 691 aaKnown RBP11.1□□□□□ -0.63
VARS2-210ENST00000490699 EFCAB8A8MWE9 144 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 TTC34A8MYJ7 566 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 K7EQS6 105 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 K7ERQ8 282 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 SMAPO00193 183 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 AP3B1O00203 1094 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 ALOX15BO15296 676 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 INSIG1O15503 277 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 TTI1O43156 1089 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 KLF8O95600 359 aaPredicted RBP11.1□□□□□ -0.63
VARS2-210ENST00000490699 POP4O95707 220 aaKnown RBP11.1□□□□□ -0.63
VARS2-210ENST00000490699 MT-CO1P00395 513 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 PRNPP04156 253 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 HLA-DQB2P05538 268 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 HOXB2P14652 356 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 NFKB1P19838 968 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 CD72P21854 359 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 CSNK1DP48730 415 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 VPS41P49754 854 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 BCL2L1Q07817 233 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 WASHC5Q12768 1159 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 MPP3Q13368 585 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 PDAP1Q13442 181 aaKnown RBP11.1□□□□□ -0.63
VARS2-210ENST00000490699 CCINQ13939 588 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 CYTH1Q15438 398 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 TRIP13Q15645 432 aaPredicted RBP11.1□□□□□ -0.63
VARS2-210ENST00000490699 PTPRNQ16849 979 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 TEX35Q5T0J7 233 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 FAM46CQ5VWP2 391 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 NAIF1Q69YI7 327 aaPredicted RBP11.1□□□□□ -0.63
VARS2-210ENST00000490699 TTC27Q6P3X3 843 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 PPP1R21Q6ZMI0 780 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 Q6ZVU0 165 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 SRLQ86TD4 932 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.1□□□□□ -0.63
VARS2-210ENST00000490699 TSEN2Q8NCE0 465 aaKnown RBP11.1□□□□□ -0.63
VARS2-210ENST00000490699 FLCNQ8NFG4 579 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 RPLP0P6Q8NHW5 317 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 UBXN4Q92575 508 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 EDAQ92838 391 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 SNF8Q96H20 258 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 EXOC2Q96KP1 924 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 NECAB3Q96P71 396 aaPredicted RBP11.1□□□□□ -0.63
VARS2-210ENST00000490699 NUDCD1Q96RS6 583 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 HEPHQ9BQS7 1158 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 TNKS2Q9H2K2 1166 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 ZDHHC6Q9H6R6 413 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 C10orf88Q9H8K7 445 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 LMAN1LQ9HAT1 526 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 USP29Q9HBJ7 922 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 POLMQ9NP87 494 aaPredicted RBP11.1□□□□□ -0.63
VARS2-210ENST00000490699 CACNA2D2Q9NY47 1150 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 HECAQ9UBI9 543 aaPredicted RBP11.1□□□□□ -0.63
VARS2-210ENST00000490699 FAM153AQ9UHL3 310 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 SLCO3A1Q9UIG8 710 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 ATP8A1Q9Y2Q0 1164 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 SIT1Q9Y3P8 196 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 XIRP2A4UGR9 3374 aa11.1□□□□□ -0.63
VARS2-210ENST00000490699 KRBA1A5PL33 1030 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 SMAD6O43541 496 aaKnown RBP11.09□□□□□ -0.63
VARS2-210ENST00000490699 SOCS5O75159 536 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 ALDH1A2O94788 518 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 PEX11BO96011 259 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 XPAP23025 273 aaPredicted RBP11.09□□□□□ -0.63
VARS2-210ENST00000490699 MCM3P25205 808 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 TARSP26639 723 aaKnown RBP11.09□□□□□ -0.63
VARS2-210ENST00000490699 PSMB4P28070 264 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 CD86P42081 329 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 IL12RB1P42701 662 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 KIR2DL1P43626 348 aaPredicted RBP11.09□□□□□ -0.63
VARS2-210ENST00000490699 CCNHP51946 323 aaPredicted RBP11.09□□□□□ -0.63
VARS2-210ENST00000490699 EPHB1P54762 984 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 GDF10P55107 478 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 MAXP61244 160 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 SLC14A2Q15849 920 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 MYLK3Q32MK0 819 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms