RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 CBX4O00257 560 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 CLDN11O75508 207 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 ZMPSTE24O75844 475 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 RHOCP08134 193 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 SLC2A3P11169 496 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 GOT1P17174 413 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 CDK11BP21127 795 aaKnown RBP7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 MMP8P22894 467 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 CD27P26842 260 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 MAT2AP31153 395 aaKnown RBP7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 RFC1P35251 1148 aaPredicted RBP7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 STAT1P42224 750 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 PCBP4P57723 403 aaKnown RBP7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 TAS2R38P59533 333 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 ZBTB16Q05516 673 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 CNTN1Q12860 1018 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 BNIP3Q12983 259 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 SLC12A1Q13621 1099 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 E2F5Q15329 346 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 TRIP6Q15654 476 aaKnown RBP7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 CLEC16AQ2KHT3 1053 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 COL28A1Q2UY09 1125 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 ANO6Q4KMQ2 910 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 ARSJQ5FYB0 599 aaPredicted RBP7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 BRMS1LQ5PSV4 323 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 RABGAP1LQ5R372 815 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 CCDC183Q5T5S1 534 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 WDR59Q6PJI9 974 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 LEKR1Q6ZMV7 388 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 DBX2Q6ZNG2 339 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 USP30Q70CQ3 517 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 IRF2BP2Q7Z5L9 587 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 GATAD2AQ86YP4 633 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 ZDHHC17Q8IUH5 632 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 PYROXD2Q8N2H3 581 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 CCDC185Q8N715 623 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 ZNF557Q8N988 423 aaPredicted RBP7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 KDM1BQ8NB78 822 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 NEK11Q8NG66 645 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 SETD7Q8WTS6 366 aaKnown RBP7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 VOPP1Q96AW1 172 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 C1orf74Q96LT6 269 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 NAP1L5Q96NT1 182 aaPredicted RBP7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 GBP4Q96PP9 640 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 MDFIQ99750 246 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 AGPAT1Q99943 283 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 SPON2Q9BUD6 331 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 MUC3BQ9H195 1237 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 SLC32A1Q9H598 525 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 TM7SF3Q9NS93 570 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 RRN3Q9NYV6 651 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 ARHGAP20Q9P2F6 1191 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 SUSD2Q9UGT4 822 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 ADAMTS1Q9UHI8 967 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 VPS51Q9UID3 782 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 VPS28Q9UK41 221 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 PPM1HQ9ULR3 514 aa7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 FLNBO75369 2602 aaKnown RBP7.49□□□□□ -1.21
PRPF4B-208ENST00000490653 CFAP46Q8IYW2 2715 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 IGLV3-10A0A075B6K4 115 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 TBC1D3DA0A087WVF3 549 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 TBC1D3IA0A087WXS9 549 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 TBC1D3EA0A087X179 549 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 TBC1D3KA0A087X1G2 549 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 A0A1W2PPC4 97 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 TBC1D3FA6NER0 549 aaPredicted RBP7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 C2CD4BA6NLJ0 364 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 TMCO5BA8MYB1 307 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 TBC1D3LB9A6J9 549 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 MCF2LO15068 1137 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 EFSO43281 561 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 RNASEH1O60930 286 aaKnown RBP7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 LSM8O95777 96 aaKnown RBP7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 F9P00740 461 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 ATXN1LP0C7T5 689 aaKnown RBP7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 TBC1D3HP0C7X1 549 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 C5AR1P21730 350 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 GKP32189 559 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 RDXP35241 583 aaKnown RBP7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 ADRA1BP35368 520 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 SCNN1AP37088 669 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 NNMTP40261 264 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 CTSKP43235 329 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 ADPRHP54922 357 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 HDAC4P56524 1084 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 CLDN6P56747 220 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 SNX16P57768 344 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 RPL7AP62424 266 aaKnown RBP7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 ARF5P84085 180 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 MYL5Q02045 173 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 OGDHQ02218 1023 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 SULT2A1Q06520 285 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 SCAPQ12770 1279 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 STX1AQ16623 288 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 TTC31Q49AM3 519 aaPredicted RBP7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 FKBP15Q5T1M5 1219 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 E4F1Q66K89 784 aaPredicted RBP7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 TBC1D3GQ6DHY5 549 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 TBC1D3CQ6IPX1 549 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 SND1Q7KZF4 910 aaKnown RBP eCLIP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms