RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CELSR1Q9NYQ6 3014 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 TCAF2A6NFQ2 919 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 M0QYT0 321 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 SMAD6O43541 496 aaKnown RBP13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 DDAH2O95865 285 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 APOEP02649 317 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 NR3C1P04150 777 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 FGF3P11487 239 aaPredicted RBP13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 CD19P15391 556 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 RRM1P23921 792 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 IGFALSP35858 605 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 RECQLP46063 649 aaPredicted RBP13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 AMPD3Q01432 767 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 NNTQ13423 1086 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 ELOCQ15369 112 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 ARHGAP44Q17R89 818 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 FAM173BQ6P4H8 233 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 LVRNQ6Q4G3 990 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 MACC1Q6ZN28 852 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 NYAP1Q6ZVC0 841 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 SFTPA2Q8IWL1 248 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 FSTL5Q8N475 847 aaPredicted RBP13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 RCBTB1Q8NDN9 531 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 OR6C4Q8NGE1 309 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 CPT1CQ8TCG5 803 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 DHX58Q96C10 678 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 PPP1R16AQ96I34 528 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 TAAR9Q96RI9 348 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 PRMT1Q99873 361 aaKnown RBP13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 C7orf25Q9BPX7 421 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 TNKS2Q9H2K2 1166 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 RDH14Q9HBH5 336 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 APPL1Q9UKG1 709 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 HS3ST2Q9Y278 367 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 B3GALT1Q9Y5Z6 326 aa13.94□□□□□ -0.18
EXOSC3-207ENST00000490516 TTLL8A6PVC2 850 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 SNAP91O60641 907 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 RAD1O60671 282 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 ENDOD1O94919 500 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 ALPIP09923 528 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 SETSIPP0DME0 302 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 CTSEP14091 401 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 EIF4A3P38919 411 aaKnown RBP13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 SEPT6Q14141 434 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 MAP9Q49MG5 647 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 SYPL2Q5VXT5 272 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 VPS36Q86VN1 386 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 HID1Q8IV36 788 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 TTC39CQ8N584 583 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 GPR156Q8NFN8 814 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 TSACCQ96A04 125 aaPredicted RBP13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 CENPTQ96BT3 561 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 EEF2KMTQ96G04 330 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 BTN2A3PQ96KV6 586 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 EDEM3Q9BZQ6 932 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 MIS12Q9H081 205 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 AKAP7Q9P0M2 348 aaPredicted RBP13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 ITM2BQ9Y287 266 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 PCDHGA3Q9Y5H0 932 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 WASF2Q9Y6W5 498 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 NF1P21359 2839 aa13.93□□□□□ -0.18
EXOSC3-207ENST00000490516 ARHGEF17Q96PE2 2063 aaPredicted RBP13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 O00370 1275 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 CAPN5O15484 640 aaPredicted RBP13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 AP1G1O43747 822 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 GLB1P16278 677 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 L1CAMP32004 1257 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 HK3P52790 923 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 EIF2S3LQ2VIR3 472 aaKnown RBP13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 LINGO4Q6UY18 593 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 DPY19L3Q6ZPD9 716 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 ASB18Q6ZVZ8 466 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 PARS2Q7L3T8 475 aaKnown RBP13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 RD3Q7Z3Z2 195 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 UNC5BQ8IZJ1 945 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 DENND6BQ8NEG7 585 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 TMEM174Q8WUU8 243 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 SLC35F5Q8WV83 523 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 ART4Q93070 314 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 PPP1R9BQ96SB3 815 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 PSMB7Q99436 277 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 KCTD10Q9H3F6 313 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 GPN2Q9H9Y4 310 aaPredicted RBP13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 DONSONQ9NYP3 566 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 FRMD4BQ9Y2L6 1034 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 APCP25054 2843 aa13.92□□□□□ -0.18
EXOSC3-207ENST00000490516 LOC101059948A0A1B0GTJ6 334 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 KCNU1A8MYU2 1149 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 YPEL5P62699 121 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 ALG11Q2TAA5 492 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 RABGAP1LQ5R372 815 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 CERCAMQ5T4B2 595 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 TTC39BQ5VTQ0 682 aaPredicted RBP13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 TCTN3Q6NUS6 607 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 FBXL22Q6P050 247 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 C16orf46Q6P387 395 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 C22orf39Q6P5X5 142 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 PIM3Q86V86 326 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 GKN2Q86XP6 184 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms