RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 CERCAMQ5T4B2 595 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 LRCH2Q5VUJ6 765 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 CDKAL1Q5VV42 579 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 FYB2Q5VWT5 728 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 TMEM81Q6P7N7 255 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 FAM47EQ6ZV65 393 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 KCTD20Q7Z5Y7 419 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 TTC30AQ86WT1 665 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 RASGEF1AQ8N9B8 481 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 MMABQ96EY8 250 aaPredicted RBP3.09□□□□□ -1.92
UBXN4-208ENST00000490163 BICD1Q96G01 975 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 AGO3Q9H9G7 860 aaKnown RBP3.09□□□□□ -1.92
UBXN4-208ENST00000490163 UNKLQ9H9P5 680 aaKnown RBP3.09□□□□□ -1.92
UBXN4-208ENST00000490163 ZBTB40Q9NUA8 1239 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 LRIT1Q9P2V4 623 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 AGTPBP1Q9UPW5 1226 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 DHX57Q6P158 1386 aaKnown RBP3.09□□□□□ -1.92
UBXN4-208ENST00000490163 ZFYVE9O95405 1425 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 DLC1Q96QB1 1528 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 FRMPD3Q5JV73 1810 aa3.09□□□□□ -1.92
UBXN4-208ENST00000490163 SDR42E2A6NKP2 422 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TNPO2O14787 897 aaKnown RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TOX4O94842 621 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 CYP2A6P11509 494 aaPredicted RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 EPHA3P29320 983 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 DMTNQ08495 405 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 COASYQ13057 564 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TRA2AQ13595 282 aaKnown RBP eCLIP3.08□□□□□ -1.926e-9■■■■□ 23.6
UBXN4-208ENST00000490163 SSPNQ14714 243 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 PPA1Q15181 289 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 RNPS1Q15287 305 aaKnown RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 SLC18A3Q16572 532 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 GSTA3Q16772 222 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 BTBD16Q32M84 506 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ODF2Q5BJF6 829 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TMEM63BQ5T3F8 832 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 EP400NLQ6ZTU2 488 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 C1orf186Q6ZWK4 172 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TTC21BQ7Z4L5 1316 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 CABP7Q86V35 215 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TC2NQ8N9U0 490 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 MCPH1Q8NEM0 835 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 MDGA1Q8NFP4 955 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 SOCS4Q8WXH5 440 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TAF4BQ92750 862 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ABHD1Q96SE0 405 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TMEM51Q9NW97 253 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 FBXL17Q9UF56 701 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TBK1Q9UHD2 729 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 HCFC2Q9Y5Z7 792 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 QRICH2Q9H0J4 1663 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 LRRC7Q96NW7 1537 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ANKRD50Q9ULJ7 1429 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 CCDC187A0A096LP49 1063 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TMEM200CA6NKL6 621 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 CLIC2O15247 247 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 CYP27B1O15528 508 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 CYP2C8P10632 490 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 GCLCP48506 637 aaPredicted RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ZNF131P52739 623 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ZNF135P52742 658 aaPredicted RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 PRKCZQ05513 592 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TMEM62Q0P6H9 643 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 BNIP3Q12983 259 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 INAQ16352 499 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ST3GAL2Q16842 350 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 BICRALQ6AI39 1079 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ATF7IPQ6VMQ6 1270 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 CHST9Q7L1S5 443 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 IRF2BP2Q7Z5L9 587 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 SYVN1Q86TM6 617 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 CCAR2Q8N163 923 aaKnown RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 SYNE4Q8N205 404 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 LNX2Q8N448 690 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 IPMKQ8NFU5 416 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 SLITRK1Q96PX8 696 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TACO1Q9BSH4 297 aaKnown RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 CARD11Q9BXL7 1154 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TSPYL1Q9H0U9 437 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 C19orf44Q9H6X5 657 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 LIN28AQ9H9Z2 209 aaKnown RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 FBRSL1Q9HCM7 1045 aaKnown RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 EIF2B3Q9NR50 452 aaKnown RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 KRT84Q9NSB2 600 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 SLCO1C1Q9NYB5 712 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 EHD2Q9NZN4 543 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 CDYLQ9Y232 598 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 SESN1Q9Y6P5 492 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 NALCNQ8IZF0 1738 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ANKRD30AQ9BXX3 1397 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 KIF15Q9NS87 1388 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 CCDC195A0A1B0GUA6 201 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 LRRD1A4D1F6 860 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 RAB27BO00194 218 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 VWA5AO00534 786 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ZNF821O75541 412 aaPredicted RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 AFPP02771 609 aaKnown RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 KRT6BP04259 564 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 RHOP08100 348 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms