RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 APOPT1Q96IL0 206 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 TGS1Q96RS0 853 aaKnown RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 RANBP9Q96S59 729 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 TMEM209Q96SK2 561 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 YME1L1Q96TA2 773 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 C19orf43Q9BQ61 176 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 FAM167BQ9BTA0 163 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 EMILIN2Q9BXX0 1053 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 PITPNM3Q9BZ71 974 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 GRIP2Q9C0E4 1043 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 RASSF4Q9H2L5 321 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 NKX2-4Q9H2Z4 354 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF576Q9H609 170 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 CWH43Q9H720 699 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 SP110Q9HB58 689 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 ARNT2Q9HBZ2 717 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 GLOD4Q9HC38 313 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 IL23AQ9NPF7 189 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 DNAJC17Q9NVM6 304 aaKnown RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 CUEDC1Q9NWM3 386 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 TBK1Q9UHD2 729 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 RIMKLBQ9ULI2 386 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 GRID1Q9ULK0 1009 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 SOX13Q9UN79 622 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 ANKRD6Q9Y2G4 727 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 STARD13Q9Y3M8 1113 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 INSL6Q9Y581 213 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 HS3ST4Q9Y661 456 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 TTC3P53804 2025 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 A0A1B0GVM2 712 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 ILVBLA1L0T0 632 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 ZNF840PA6NDX5 716 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 TCAF2A6NFQ2 919 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 ERICH4A6NGS2 130 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 KCNK1O00180 336 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 TYROBPO43914 113 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 GLRA3O75311 464 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 DCTN3O75935 186 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 LUC7L3O95232 432 aaKnown RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 TGDSO95455 350 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 ASMTLO95671 621 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 MOCS2O96007 188 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 JCHAINP01591 159 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 FGBP02675 491 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 MPOP05164 745 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 OR4Q2P0C623 313 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 NEFHP12036 1026 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 COL6A2P12110 1019 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 FOSL2P15408 326 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 VAV1P15498 845 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 HLA-DPA1P20036 260 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 GRK2P25098 689 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 ADRA1DP25100 572 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 PSMB4P28070 264 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 OR1E1P30953 314 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 CRHR1P34998 444 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 IRS1P35568 1242 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 SCTRP47872 440 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 RASSF2P50749 326 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 HK2P52789 917 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 NAA20P61599 178 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 PITX1P78337 314 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 DUSP4Q13115 394 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 ZNF177Q13360 481 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 SERINC3Q13530 473 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 CRYMQ14894 314 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 CCDC153Q494R4 210 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 RAB6CQ53S08 254 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 MS4A13Q5J8X5 152 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 RTP2Q5QGT7 225 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 MPP7Q5T2T1 576 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 ADGRF1Q5T601 910 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 UNC5AQ6ZN44 842 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 GALNT7Q86SF2 657 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 FIBCD1Q8N539 461 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 PPM1NQ8N819 430 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 BANPQ8N9N5 519 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 DCAKDQ8WVC6 231 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 MRPS31Q92665 395 aaKnown RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 PSMG2Q969U7 264 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 TSPAN17Q96FV3 270 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 CERS2Q96G23 380 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 CFAP36Q96G28 342 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 SAMD11Q96NU1 681 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 RPRD1AQ96P16 312 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 ZNF317Q96PQ6 595 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 PRMT1Q99873 361 aaKnown RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 TBL1YQ9BQ87 522 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 KIFC1Q9BW19 673 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 POLR1EQ9GZS1 481 aaKnown RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 RAB6CQ9H0N0 254 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 NMUR1Q9HB89 426 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 RXFP1Q9HBX9 757 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 TMEM30AQ9NV96 361 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 RBM22Q9NW64 420 aaKnown RBP eCLIP6.46□□□□□ -1.382e-7■■■■□ 25
SF3A3-208ENST00000489537 OSER1Q9NX31 292 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 CACNG4Q9UBN1 327 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 SEPT3Q9UH03 358 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms