RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 TM6SF2Q9BZW4 377 aa11.98□□□□□ -0.49
ACTN4-206ENST00000489451 ZYG11BQ9C0D3 744 aa11.98□□□□□ -0.49
ACTN4-206ENST00000489451 CEP44Q9C0F1 390 aa11.98□□□□□ -0.49
ACTN4-206ENST00000489451 LMBRD1Q9NUN5 540 aa11.98□□□□□ -0.49
ACTN4-206ENST00000489451 PPARGC1AQ9UBK2 798 aaKnown RBP11.98□□□□□ -0.49
ACTN4-206ENST00000489451 ITM2BQ9Y287 266 aa11.98□□□□□ -0.49
ACTN4-206ENST00000489451 AK5Q9Y6K8 562 aa11.98□□□□□ -0.49
ACTN4-206ENST00000489451 A6NNZ2 444 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 PCDH8O95206 1070 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 LSM8O95777 96 aaKnown RBP11.97□□□□□ -0.49
ACTN4-206ENST00000489451 PAK4O96013 591 aaPredicted RBP11.97□□□□□ -0.49
ACTN4-206ENST00000489451 MT-CO3P00414 261 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 AKT2P31751 481 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 L1CAMP32004 1257 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 NEK3P51956 506 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 SNX16P57768 344 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 BPIFB4P59827 614 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 ATP11AP98196 1134 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 NRG1Q02297 640 aaPredicted RBP11.97□□□□□ -0.49
ACTN4-206ENST00000489451 CCDC14Q49A88 953 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 CARD16Q5EG05 197 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 LRRC31Q6UY01 552 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 ARCQ7LC44 396 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 TMC6Q7Z403 805 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 PTAR1Q7Z6K3 402 aaPredicted RBP11.97□□□□□ -0.49
ACTN4-206ENST00000489451 PHLDB2Q86SQ0 1253 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 PCDH20Q8N6Y1 951 aaKnown RBP11.97□□□□□ -0.49
ACTN4-206ENST00000489451 GPT2Q8TD30 523 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 ARHGEF2Q92974 986 aaKnown RBP11.97□□□□□ -0.49
ACTN4-206ENST00000489451 CCDC114Q96M63 670 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 PCDHB18PQ96TA0 734 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 HEPHQ9BQS7 1158 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 SLC17A9Q9BYT1 436 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 STK33Q9BYT3 514 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 NOL6Q9H6R4 1146 aaKnown RBP11.97□□□□□ -0.49
ACTN4-206ENST00000489451 ATP13A1Q9HD20 1204 aa11.97□□□□□ -0.49
ACTN4-206ENST00000489451 FARP1Q9Y4F1 1045 aaPredicted RBP11.97□□□□□ -0.49
ACTN4-206ENST00000489451 LRP4O75096 1905 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 C2CD4BA6NLJ0 364 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 K7ESM1 405 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 AP1G1O43747 822 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 OPA1O60313 960 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 NME1P15531 152 aaKnown RBP11.96□□□□□ -0.49
ACTN4-206ENST00000489451 MMP8P22894 467 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 ADRA1BP35368 520 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 HDAC4P56524 1084 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 JAM2P57087 298 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 TLE3Q04726 772 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 EIF2B5Q13144 721 aaKnown RBP11.96□□□□□ -0.49
ACTN4-206ENST00000489451 CDO1Q16878 200 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 TBC1D25Q3MII6 688 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 TCP11X2Q5H9J9 407 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 KIAA1161Q6NSJ0 714 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 LEKR1Q6ZMV7 388 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 CCDC185Q8N715 623 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 FAM181AQ8N9Y4 354 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 NETO2Q8NC67 525 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 ZNF548Q8NEK5 533 aaPredicted RBP11.96□□□□□ -0.49
ACTN4-206ENST00000489451 SLC30A5Q8TAD4 765 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 RXFP2Q8WXD0 754 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 IFT43Q96FT9 208 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 C1QTNF2Q9BXJ5 285 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 KLC2Q9H0B6 622 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 PDCL3Q9H2J4 239 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 TCEAL2Q9H3H9 227 aaPredicted RBP11.96□□□□□ -0.49
ACTN4-206ENST00000489451 DYRK4Q9NR20 520 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 DNAJC28Q9NX36 388 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 TAB2Q9NYJ8 693 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 NLGN3Q9NZ94 848 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 HS3ST3A1Q9Y663 406 aa11.96□□□□□ -0.49
ACTN4-206ENST00000489451 RP1P56715 2156 aa11.96□□□□□ -0.5
ACTN4-206ENST00000489451 KIF26BQ2KJY2 2108 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 SPTY2D1-AS1A0A0U1RR47 76 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 IGLON5A6NGN9 336 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 AREL1O15033 823 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 SCAMP1O15126 338 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 LZTS3O60299 673 aaPredicted RBP11.95□□□□□ -0.5
ACTN4-206ENST00000489451 GFPT2O94808 682 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 LRIG2O94898 1065 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 WISP1O95388 367 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 MBD3O95983 291 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 CSF2P04141 144 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 UNGP13051 313 aaPredicted RBP11.95□□□□□ -0.5
ACTN4-206ENST00000489451 ITIH2P19823 946 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 PFN3P60673 137 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 RPS21P63220 83 aaKnown RBP11.95□□□□□ -0.5
ACTN4-206ENST00000489451 DAB2P98082 770 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 E2F1Q01094 437 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 SLC20A2Q08357 652 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 LRRC73Q5JTD7 316 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 ACBD5Q5T8D3 534 aaPredicted RBP11.95□□□□□ -0.5
ACTN4-206ENST00000489451 RETSATQ6NUM9 610 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 NYAP1Q6ZVC0 841 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 SPACA3Q8IXA5 215 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 PLPP6Q8IY26 295 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 CENPIQ92674 756 aaPredicted RBP11.95□□□□□ -0.5
ACTN4-206ENST00000489451 FGF11Q92914 225 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 ISG20Q96AZ6 181 aaKnown RBP11.95□□□□□ -0.5
ACTN4-206ENST00000489451 PPP1R16AQ96I34 528 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 HIC2Q96JB3 615 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms