RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 AGRPO00253 132 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 NVLO15381 856 aaKnown RBP16.48■□□□□ 0.23
USP48-210ENST00000489108 AP1G1O43747 822 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 GRAP2O75791 330 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 CELA2BP08218 269 aaPredicted RBP16.48■□□□□ 0.23
USP48-210ENST00000489108 ITGB7P26010 798 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 DNA2P51530 1060 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 CLCN6P51797 869 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 THOP1P52888 689 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 NME3Q13232 169 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 CLCA4Q14CN2 919 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 FAXCQ5TGI0 409 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 ZFAND4Q86XD8 727 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 HTR3CQ8WXA8 447 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 CCDC74AQ96AQ1 378 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 KREMEN1Q96MU8 473 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 SLC2A13Q96QE2 648 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 GFM1Q96RP9 751 aaKnown RBP16.48■□□□□ 0.23
USP48-210ENST00000489108 TSG101Q99816 390 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 HEPHQ9BQS7 1158 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 SRRTQ9BXP5 876 aaKnown RBP16.48■□□□□ 0.23
USP48-210ENST00000489108 SLC13A1Q9BZW2 595 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 GEMIN8Q9NWZ8 242 aaKnown RBP16.48■□□□□ 0.23
USP48-210ENST00000489108 SEPT10Q9P0V9 454 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 A0A1W2PQM1 296 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 D6RAR5 112 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 LETM1O95202 739 aaPredicted RBP16.47■□□□□ 0.23
USP48-210ENST00000489108 JMJD7P0C870 316 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 KRT5P13647 590 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 PTK2BQ14289 1009 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 PARS2Q7L3T8 475 aaKnown RBP16.47■□□□□ 0.23
USP48-210ENST00000489108 PTRH1Q86Y79 214 aaKnown RBP16.47■□□□□ 0.23
USP48-210ENST00000489108 SDR16C5Q8N3Y7 309 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 DCAF4L2Q8NA75 395 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 ZSCAN1Q8NBB4 408 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 ZNF606Q8WXB4 792 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 ASB12Q8WXK4 309 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 CENPTQ96BT3 561 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 SIRPGQ9P1W8 387 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 GGT7Q9UJ14 662 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 SNX10Q9Y5X0 201 aa16.47■□□□□ 0.23
USP48-210ENST00000489108 PRAMEF33A0A0G2JMD5 474 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 TRIM49BA6NDI0 452 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 PMM2O15305 246 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 TSPAN6O43657 245 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 PRAMEF10O60809 474 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 ADCY5O95622 1261 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 RPLP0P05388 317 aaKnown RBP16.46■□□□□ 0.23
USP48-210ENST00000489108 ITIH1P19827 911 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 NOS2P35228 1153 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 ABL2P42684 1182 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 GCNT1Q02742 428 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 MTA1Q13330 715 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 CARD16Q5EG05 197 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 SETD3Q86TU7 594 aaPredicted RBP16.46■□□□□ 0.23
USP48-210ENST00000489108 KYQ8NBH2 561 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 DENND6BQ8NEG7 585 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 OR7D4Q8NG98 312 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 TBATAQ96M53 351 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 TMEM74Q96NL1 305 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 FUCA2Q9BTY2 467 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 SPON2Q9BUD6 331 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 CPEB1Q9BZB8 566 aaKnown RBP16.46■□□□□ 0.23
USP48-210ENST00000489108 ACP6Q9NPH0 428 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 ANLNQ9NQW6 1124 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 DOLKQ9UPQ8 538 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 CNTN6Q9UQ52 1028 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 ITM2BQ9Y287 266 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 LOXL2Q9Y4K0 774 aa16.46■□□□□ 0.23
USP48-210ENST00000489108 ZFC3H1O60293 1989 aaKnown RBP16.46■□□□□ 0.22
USP48-210ENST00000489108 RELNP78509 3460 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 NEMP1O14524 444 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 MED7O43513 233 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 GLI1P08151 1106 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 CR2P20023 1033 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 CCKBRP32239 447 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 IGFALSP35858 605 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 ETV5P41161 510 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 CCNHP51946 323 aaPredicted RBP16.45■□□□□ 0.22
USP48-210ENST00000489108 PPARDQ03181 441 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 PDCLQ13371 301 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 TCEA2Q15560 299 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 IGFBP7Q16270 282 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 SKIDA1Q1XH10 827 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 EFHC1Q5JVL4 640 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 TFAP2DQ7Z6R9 452 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 VPS36Q86VN1 386 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 ZSCAN30Q86W11 494 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 ZNF683Q8IZ20 524 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 ARL10Q8N8L6 244 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 EHBP1Q8NDI1 1231 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 SPATA32Q96LK8 384 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 LRRN3Q9H3W5 708 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 ZDHHC6Q9H6R6 413 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 MPP6Q9NZW5 540 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 ACTL7AQ9Y615 435 aa16.45■□□□□ 0.22
USP48-210ENST00000489108 DRGXA6NNA5 263 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 C16orf96A6NNT2 1141 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 I6L893 689 aaPredicted RBP16.44■□□□□ 0.22
USP48-210ENST00000489108 M0QYT0 321 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms