RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 SPPL2BQ8TCT7 592 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 ADAMTS17Q8TE56 1095 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 GAB3Q8WWW8 586 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 ATRIPQ8WXE1 791 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 NUDT11Q96G61 164 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 FUBP3Q96I24 572 aaKnown RBP eCLIP8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 LCORQ96JN0 433 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 TNIP3Q96KP6 325 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 SYT15Q9BQS2 421 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 NDST4Q9H3R1 872 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 SMYD3Q9H7B4 428 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 AASDHPPTQ9NRN7 309 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 ZDHHC7Q9NXF8 308 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 IGSF9Q9P2J2 1179 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 ATP8B3O60423 1300 aa8.46□□□□□ -1.06
TRAPPC12-221ENST00000489032 DENND4AQ7Z401 1863 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 A0A0A6YYJ9 748 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 CCDC195A0A1B0GUA6 201 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 GTPBP10A4D1E9 387 aaKnown RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 MTMR11A4FU01 709 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 SLC30A4O14863 429 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 SNUPNO95149 360 aaKnown RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 OR4Q2P0C623 313 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 CD58P19256 250 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 ACAT1P24752 427 aaKnown RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 HOXA9P31269 272 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 GPR15P49685 360 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 NEK2P51955 445 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 CDH8P55286 799 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 LGALS4P56470 323 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 NRG3P56975 720 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 LRMPQ12912 555 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 CUL2Q13617 745 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 ACAP2Q15057 778 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 EXOC3L4Q17RC7 722 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 MGAT5BQ3V5L5 792 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 PITRM1Q5JRX3 1037 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 TOR2AQ5JU69 321 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 ENOSF1Q7L5Y1 443 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 SPATA2LQ8IUW3 424 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 REXO1L1PQ8IX06 675 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 TCEAL8Q8IYN2 117 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 C12orf76Q8N812 135 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 C1orf162Q8NEQ5 155 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 CMASQ8NFW8 434 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 OR10T2Q8NGX3 314 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 KBTBD7Q8WVZ9 684 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 SEMA4DQ92854 862 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 PDLIM2Q96JY6 352 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 PGLYRP2Q96PD5 576 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 SPATA25Q9BR10 227 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 MRPL45Q9BRJ2 306 aaKnown RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 PITHD1Q9GZP4 211 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 INTS2Q9H0H0 1204 aaKnown RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 APOBEC3GQ9HC16 384 aaKnown RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 CCM2LQ9NUG4 571 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 POLR3BQ9NW08 1133 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 TAB2Q9NYJ8 693 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 GCNT4Q9P109 453 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 DLGAP2Q9P1A6 1054 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 HSFX1Q9UBD0 423 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 MAGEL2Q9UJ55 1249 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 GMEB2Q9UKD1 530 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 CA14Q9ULX7 337 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 PCDHGA2Q9Y5H1 932 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 CACNA1IQ9P0X4 2223 aa8.45□□□□□ -1.06
TRAPPC12-221ENST00000489032 GPR179Q6PRD1 2367 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 C9orf118A6NHY6 69 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 DAPK3O43293 454 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 NARSO43776 548 aaKnown RBP8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 H2AFYO75367 372 aaKnown RBP8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 KLHL18O94889 574 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 PROS1P07225 676 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 LMO2P25791 158 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 KCNC1P48547 511 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 NDST1P52848 882 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 COPB1P53618 953 aaKnown RBP8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 SESN2P58004 480 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 PSMC1P62191 440 aaKnown RBP8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 RPL10AP62906 217 aaKnown RBP8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 SHC2P98077 582 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 TOP3AQ13472 1001 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 VEPH1Q14D04 833 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 KRT31Q15323 416 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 TAF12Q16514 161 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 MDH1BQ5I0G3 518 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 GPR149Q86SP6 731 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 DHX40Q8IX18 779 aaKnown RBP8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 LRRC56Q8IYG6 542 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 KLHL36Q8N4N3 616 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 B3GALNT2Q8NCR0 500 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 MYCBPAPQ8TBZ2 947 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 SMG7Q92540 1137 aaKnown RBP8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 ZNF512Q96ME7 567 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 SEPT5Q99719 369 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 CRACR2AQ9BSW2 395 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 MED10Q9BTT4 135 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 VPS16Q9H269 839 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 CISHQ9NSE2 258 aa8.44□□□□□ -1.06
TRAPPC12-221ENST00000489032 LIMA1Q9UHB6 759 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms