RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 BICD2Q8TD16 824 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 KCNE4Q8WWG9 221 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 RABGGTAQ92696 567 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 HAS1Q92839 578 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 ARRDC3Q96B67 414 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 REXO5Q96IC2 774 aaKnown RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 C1orf74Q96LT6 269 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 FAM129AQ9BZQ8 928 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 SLC6A15Q9H2J7 730 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 TTC12Q9H892 705 aaPredicted RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 FBRSL1Q9HCM7 1045 aaKnown RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 FANCFQ9NPI8 374 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 ZBTB40Q9NUA8 1239 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 ANO10Q9NW15 660 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 RABL2AQ9UBK7 228 aaPredicted RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 DKK3Q9UBP4 350 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 HSPB7Q9UBY9 170 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 FBXL17Q9UF56 701 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 CTNNA3Q9UI47 895 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 LEF1Q9UJU2 399 aaPredicted RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 INTS6Q9UL03 887 aaKnown RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 FAM184BQ9ULE4 1060 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 PCDHA10Q9Y5I2 948 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 NFS1Q9Y697 457 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 SESN1Q9Y6P5 492 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 LOC102723996A0A087X1L8 192 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 RNF103-CHMP3A0A140T963 221 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 AGAP5A6NIR3 686 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 ENO4A6NNW6 628 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 M0QZQ0 153 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 RNF103O00237 685 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 NRP1O14786 923 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 NKX2-8O15522 239 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 AGFG2O95081 481 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 SNX4O95219 450 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 TRIM16O95361 564 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 OPN1MWP04001 364 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 CYP3A4P08684 503 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 OPN1MW2P0DN77 364 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 OPN1MW3P0DN78 364 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 HGFP14210 728 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 ZFXP17010 805 aaPredicted RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 CCNA2P20248 432 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 NTSR1P30989 418 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 HNF1BP35680 557 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 ACAA2P42765 397 aaKnown RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 CPA2P48052 419 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 PGDP52209 483 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 ZNF134P52741 427 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 PNLIPRP2P54317 469 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 FOXL2P58012 376 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 LOXL3P58215 753 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 TIRAPP58753 221 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 LILRA4P59901 499 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 RPL15P61313 204 aaKnown RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 KRT17Q04695 432 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 CSTF3Q12996 717 aaKnown RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 MTAPQ13126 283 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 GRAPQ13588 217 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 IL11RAQ14626 422 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 RRP1BQ14684 758 aaKnown RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 HFEQ30201 348 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 SLC39A12Q504Y0 691 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 TMEM196Q5HYL7 178 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 ZNF569Q5MCW4 686 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 KRT79Q5XKE5 535 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 KIAA0930Q6ICG6 404 aaPredicted RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 ZNF529Q6P280 563 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 MTHFD1LQ6UB35 978 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 MEX3BQ6ZN04 569 aaKnown RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 UBE3BQ7Z3V4 1068 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 ADGRG3Q86Y34 549 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 PEX5LQ8IYB4 626 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 GPR135Q8IZ08 494 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 MAML2Q8IZL2 1156 aaPredicted RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 SYNE4Q8N205 404 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 PI4KAP1Q8N8J0 262 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 C9orf106Q8NAJ2 232 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 ATAD1Q8NBU5 361 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 PDPRQ8NCN5 879 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 CADM4Q8NFZ8 388 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 OR14K1Q8NGZ2 314 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 SLC35B2Q8TB61 432 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 DNAJB14Q8TBM8 379 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 RAB40AQ8WXH6 277 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 OVCA2Q8WZ82 227 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 MRPS27Q92552 414 aaKnown RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 NPIPB3Q92617 1050 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 LRRC59Q96AG4 307 aaKnown RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 ARSGQ96EG1 525 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 VPS39Q96JC1 886 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 KLHL15Q96M94 604 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 HIST1H2AAQ96QV6 131 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 GPHA2Q96T91 129 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 CXorf36Q9H7Y0 433 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 AGO3Q9H9G7 860 aaKnown RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 SERINC1Q9NRX5 453 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 CYP39A1Q9NYL5 469 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 NCKIPSDQ9NZQ3 722 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms