RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 MCEEQ96PE7 176 aa12.66□□□□□ -0.38
SREBF1-215ENST00000487401 EPAS1Q99814 870 aa12.66□□□□□ -0.38
SREBF1-215ENST00000487401 CNPY3Q9BT09 278 aa12.66□□□□□ -0.38
SREBF1-215ENST00000487401 OSBPL1AQ9BXW6 950 aa12.66□□□□□ -0.38
SREBF1-215ENST00000487401 DKK4Q9UBT3 224 aa12.66□□□□□ -0.38
SREBF1-215ENST00000487401 IPO11Q9UI26 975 aaKnown RBP12.66□□□□□ -0.38
SREBF1-215ENST00000487401 PCNX2A6NKB5 2137 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 ADAMTS9Q9P2N4 1935 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 IGLON5A6NGN9 336 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 TRIM38O00635 465 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 CCP110O43303 1012 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 TSPAN6O43657 245 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 SIGLEC6O43699 453 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 CREB3O43889 395 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 UGT2B4P06133 528 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 ALPPL2P10696 532 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 DGKAP23743 735 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 GKP32189 559 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 DAB2P98082 770 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 TYRO3Q06418 890 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 CAMK2BQ13554 666 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 NCAPHQ15003 741 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 HES3Q5TGS1 186 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 PPP1R2P3Q6NXS1 205 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 GCNT7Q6ZNI0 430 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 ABI3BPQ7Z7G0 1075 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 PYROXD2Q8N2H3 581 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 SLC25A45Q8N413 288 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 RTL3Q8N8U3 475 aaKnown RBP12.65□□□□□ -0.38
SREBF1-215ENST00000487401 OR2AP1Q8NGE2 309 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 IFT43Q96FT9 208 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 CATSPERBQ9H7T0 1116 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 DNAJC28Q9NX36 388 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 GPSM3Q9Y4H4 160 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 PI4KAP42356 2102 aa12.65□□□□□ -0.38
SREBF1-215ENST00000487401 NEMP2A6NFY4 417 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 SMTNL1A8MU46 457 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 FPGTO14772 594 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 FFAR2O15552 330 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 PIAS2O75928 621 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 IGSF6O95976 241 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 ATP1A3P13637 1013 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 ACP1P24666 158 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 RABIFP47224 123 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 AIF1P55008 147 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 CLDN6P56747 220 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 YBEYP58557 167 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-215ENST00000487401 RPL7AP62424 266 aaKnown RBP12.64□□□□□ -0.39
SREBF1-215ENST00000487401 E2F1Q01094 437 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 TARDBPQ13148 414 aaKnown RBP eCLIP12.64□□□□□ -0.39
SREBF1-215ENST00000487401 PROX2Q3B8N5 592 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 FILIP1LQ4L180 1135 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 ZNF542PQ5EBM4 170 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 ATXN7L2Q5T6C5 722 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-215ENST00000487401 GDPD4Q6W3E5 623 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 KYAT3Q6YP21 454 aaKnown RBP12.64□□□□□ -0.39
SREBF1-215ENST00000487401 APTXQ7Z2E3 356 aaKnown RBP12.64□□□□□ -0.39
SREBF1-215ENST00000487401 TTC7BQ86TV6 843 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 MCOLN2Q8IZK6 566 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 OR4C6Q8NH72 309 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 HNRNPLLQ8WVV9 542 aaKnown RBP12.64□□□□□ -0.39
SREBF1-215ENST00000487401 CASKIN2Q8WXE0 1202 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 ARHGEF26Q96DR7 871 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 BMFQ96LC9 184 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 GDAP1L1Q96MZ0 367 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 KLHL32Q96NJ5 620 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 LENG8Q96PV6 779 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-215ENST00000487401 PARVAQ9NVD7 372 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 UCKL1Q9NWZ5 548 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 DONSONQ9NYP3 566 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 FZD10Q9ULW2 581 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 NEU3Q9UQ49 428 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 AK5Q9Y6K8 562 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 NUMA1Q14980 2115 aa12.64□□□□□ -0.39
SREBF1-215ENST00000487401 POM121BA6NF01 834 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 TMCO5BA8MYB1 307 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 RASA4BC9J798 803 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 RAD51BO15315 384 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 FGF10O15520 208 aaPredicted RBP12.63□□□□□ -0.39
SREBF1-215ENST00000487401 RASA4O43374 803 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 TMCC1O94876 653 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 XPAP23025 273 aaPredicted RBP12.63□□□□□ -0.39
SREBF1-215ENST00000487401 ABL2P42684 1182 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 RHOAP61586 193 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 HNRNPKP61978 463 aaKnown RBP eCLIP12.63□□□□□ -0.394e-13■■■■□ 20.7
SREBF1-215ENST00000487401 FGL2Q14314 439 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 PARP15Q460N3 678 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 ANO6Q4KMQ2 910 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 INO80DQ53TQ3 878 aaPredicted RBP12.63□□□□□ -0.39
SREBF1-215ENST00000487401 TMC6Q7Z403 805 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 IRF2BP2Q7Z5L9 587 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 SLC22A18ASQ8N1D0 253 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 ASB12Q8WXK4 309 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 NXPE2Q96DL1 559 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 HMCESQ96FZ2 354 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 VCPIP1Q96JH7 1222 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 C1QTNF2Q9BXJ5 285 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 TTYH3Q9C0H2 523 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 HSD3B7Q9H2F3 369 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 EVA1BQ9NVM1 165 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms