RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 C8orf48Q96LL4 319 aa26.45■■□□□ 1.82
HLA-C-208ENST00000487245 FBXO44Q9H4M3 255 aa26.45■■□□□ 1.82
HLA-C-208ENST00000487245 TCF7L2Q9NQB0 619 aa26.45■■□□□ 1.82
HLA-C-208ENST00000487245 TRMT13Q9NUP7 481 aaKnown RBP26.45■■□□□ 1.82
HLA-C-208ENST00000487245 PDP2Q9P2J9 529 aa26.45■■□□□ 1.82
HLA-C-208ENST00000487245 E9PAM4 449 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 SLCO1B7G3V0H7 640 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 ALDH1A1P00352 501 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 MTTPP55157 894 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 MLLT6P55198 1093 aaPredicted RBP26.44■■□□□ 1.82
HLA-C-208ENST00000487245 DSC1Q08554 894 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 CUL3Q13618 768 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 SLC24A5Q71RS6 500 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 DEFB107AQ8IZN7 70 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 CPSF7Q8N684 471 aaKnown RBP26.44■■□□□ 1.82
HLA-C-208ENST00000487245 ACVR1CQ8NER5 493 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 SPATA22Q8NHS9 363 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 SHKBP1Q8TBC3 707 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 STYXQ8WUJ0 223 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 VTI1BQ9UEU0 232 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 SLC39A10Q9ULF5 831 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 POMPQ9Y244 141 aa26.44■■□□□ 1.82
HLA-C-208ENST00000487245 A0A1W2PQH9 124 aa26.43■■□□□ 1.82
HLA-C-208ENST00000487245 HDAC3O15379 428 aa26.43■■□□□ 1.82
HLA-C-208ENST00000487245 SBK3P0C264 359 aa26.43■■□□□ 1.82
HLA-C-208ENST00000487245 RPL26P61254 145 aaKnown RBP26.43■■□□□ 1.82
HLA-C-208ENST00000487245 SLC12A1Q13621 1099 aa26.43■■□□□ 1.82
HLA-C-208ENST00000487245 NOMO2Q5JPE7 1267 aa26.43■■□□□ 1.82
HLA-C-208ENST00000487245 NUP93Q8N1F7 819 aa26.43■■□□□ 1.82
HLA-C-208ENST00000487245 RBM22Q9NW64 420 aaKnown RBP eCLIP26.43■■□□□ 1.82
HLA-C-208ENST00000487245 PRPF19Q9UMS4 504 aaKnown RBP26.43■■□□□ 1.82
HLA-C-208ENST00000487245 MAGED2Q9UNF1 606 aaPredicted RBP26.43■■□□□ 1.82
HLA-C-208ENST00000487245 TLR6Q9Y2C9 796 aa26.43■■□□□ 1.82
HLA-C-208ENST00000487245 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.42■■□□□ 1.82
HLA-C-208ENST00000487245 TARM1B6A8C7 271 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 MSI1O43347 362 aaKnown RBP26.42■■□□□ 1.82
HLA-C-208ENST00000487245 THRAP10827 490 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 PRKAR2AP13861 404 aaKnown RBP26.42■■□□□ 1.82
HLA-C-208ENST00000487245 ADRA1AP35348 466 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 RPL14P50914 215 aaKnown RBP26.42■■□□□ 1.82
HLA-C-208ENST00000487245 EPHB1P54762 984 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 TBL3Q12788 808 aaKnown RBP26.42■■□□□ 1.82
HLA-C-208ENST00000487245 PRKAA1Q13131 559 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 ARTNQ5T4W7 220 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 RNF180Q86T96 592 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 IPMKQ8NFU5 416 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 FATE1Q969F0 183 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 FICDQ9BVA6 458 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 TASP1Q9H6P5 420 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 NMUR1Q9HB89 426 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 TBC1D13Q9NVG8 400 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 HS3ST4Q9Y661 456 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 DDHD2O94830 711 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 PAMP19021 973 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 ABCG1P45844 678 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 FAM189BP81408 668 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 DENND5AQ6IQ26 1287 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 SETD3Q86TU7 594 aaPredicted RBP26.42■■□□□ 1.82
HLA-C-208ENST00000487245 PDSS2Q86YH6 399 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 TRAPPC9Q96Q05 1148 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 OR52B2Q96RD2 323 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 ZNF385DQ9H6B1 395 aa26.42■■□□□ 1.82
HLA-C-208ENST00000487245 ABI2Q9NYB9 513 aaPredicted RBP26.42■■□□□ 1.82
HLA-C-208ENST00000487245 CASP8AP2Q9UKL3 1982 aa26.41■■□□□ 1.82
HLA-C-208ENST00000487245 E9PBE3 544 aa26.41■■□□□ 1.82
HLA-C-208ENST00000487245 KLHL41O60662 606 aa26.41■■□□□ 1.82
HLA-C-208ENST00000487245 SNUPNO95149 360 aaKnown RBP26.41■■□□□ 1.82
HLA-C-208ENST00000487245 IRX1P78414 480 aaPredicted RBP26.41■■□□□ 1.82
HLA-C-208ENST00000487245 HERC3Q15034 1050 aa26.41■■□□□ 1.82
HLA-C-208ENST00000487245 PRKD2Q9BZL6 878 aa26.41■■□□□ 1.82
HLA-C-208ENST00000487245 VPS28Q9UK41 221 aa26.41■■□□□ 1.82
HLA-C-208ENST00000487245 SSX2IPQ9Y2D8 614 aa26.41■■□□□ 1.82
HLA-C-208ENST00000487245 TCAF1Q9Y4C2 921 aa26.41■■□□□ 1.82
HLA-C-208ENST00000487245 F8W810 466 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 CASQ2O14958 399 aaPredicted RBP26.4■■□□□ 1.82
HLA-C-208ENST00000487245 PDE5AO76074 875 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 MT-CYBP00156 380 aaPredicted RBP26.4■■□□□ 1.82
HLA-C-208ENST00000487245 SLC35E2BP0CK96 405 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 GRIA4P48058 902 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 PAPOLAP51003 745 aaKnown RBP26.4■■□□□ 1.82
HLA-C-208ENST00000487245 ASPHQ12797 758 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 USP10Q14694 798 aaKnown RBP26.4■■□□□ 1.82
HLA-C-208ENST00000487245 SEL1L3Q68CR1 1132 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 RNF111Q6ZNA4 994 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 RAPH1Q70E73 1250 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 RTN4RL1Q86UN2 441 aaPredicted RBP26.4■■□□□ 1.82
HLA-C-208ENST00000487245 ZNF280BQ86YH2 543 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 COLGALT2Q8IYK4 626 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 PDCD6IPQ8WUM4 868 aaKnown RBP26.4■■□□□ 1.82
HLA-C-208ENST00000487245 SLC39A13Q96H72 371 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 UBE2OQ9C0C9 1292 aaKnown RBP26.4■■□□□ 1.82
HLA-C-208ENST00000487245 YIPF3Q9GZM5 350 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 OR4Q2P0C623 313 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 CKBP12277 381 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 MPSTP25325 297 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 PIK3R1P27986 724 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 MAGEA11P43364 429 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 PGFP49763 221 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 CCNHP51946 323 aaPredicted RBP26.4■■□□□ 1.82
HLA-C-208ENST00000487245 NDST2P52849 883 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms