RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 RPL7AP62424 266 aaKnown RBP24.97■■□□□ 1.59
LIME1-206ENST00000487026 ZNF542PQ5EBM4 170 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 DNAJC24Q6P3W2 148 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 Q6ZSR6 202 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 SLC22A18ASQ8N1D0 253 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 AOPEPQ8N6M6 819 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 NTAN1Q96AB6 310 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 BMFQ96LC9 184 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 RETREG1Q9H6L5 497 aa24.97■■□□□ 1.59
LIME1-206ENST00000487026 TRPM6Q9BX84 2022 aa24.96■■□□□ 1.59
LIME1-206ENST00000487026 TCRBV5S1A1TA0A578 114 aa24.96■■□□□ 1.59
LIME1-206ENST00000487026 C16orf96A6NNT2 1141 aa24.96■■□□□ 1.59
LIME1-206ENST00000487026 RAD51BO15315 384 aa24.96■■□□□ 1.59
LIME1-206ENST00000487026 RPS21P63220 83 aaKnown RBP24.96■■□□□ 1.59
LIME1-206ENST00000487026 C1QBPQ07021 282 aaKnown RBP24.96■■□□□ 1.59
LIME1-206ENST00000487026 PROX2Q3B8N5 592 aa24.96■■□□□ 1.59
LIME1-206ENST00000487026 ATXN7L2Q5T6C5 722 aaPredicted RBP24.96■■□□□ 1.59
LIME1-206ENST00000487026 PTAR1Q7Z6K3 402 aaPredicted RBP24.96■■□□□ 1.59
LIME1-206ENST00000487026 ABI3BPQ7Z7G0 1075 aa24.96■■□□□ 1.59
LIME1-206ENST00000487026 ZNF354CQ86Y25 554 aa24.96■■□□□ 1.59
LIME1-206ENST00000487026 HNRNPLLQ8WVV9 542 aaKnown RBP24.96■■□□□ 1.59
LIME1-206ENST00000487026 VOPP1Q96AW1 172 aa24.96■■□□□ 1.59
LIME1-206ENST00000487026 MCEEQ96PE7 176 aa24.96■■□□□ 1.59
LIME1-206ENST00000487026 KLC2Q9H0B6 622 aa24.96■■□□□ 1.59
LIME1-206ENST00000487026 NOL6Q9H6R4 1146 aaKnown RBP24.96■■□□□ 1.59
LIME1-206ENST00000487026 DKK4Q9UBT3 224 aa24.96■■□□□ 1.59
LIME1-206ENST00000487026 GGT7Q9UJ14 662 aa24.96■■□□□ 1.59
LIME1-206ENST00000487026 POM121BA6NF01 834 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 IGLON5A6NGN9 336 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 GOLGA6L22H0YM25 854 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 FFAR2O15552 330 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 BUB1O43683 1085 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 KDELR3O43731 214 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 ABL2P42684 1182 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 ZNF143P52747 638 aaPredicted RBP24.95■■□□□ 1.58
LIME1-206ENST00000487026 GEMIN4P57678 1058 aaKnown RBP24.95■■□□□ 1.58
LIME1-206ENST00000487026 TARDBPQ13148 414 aaKnown RBP eCLIP24.95■■□□□ 1.58
LIME1-206ENST00000487026 MYLK3Q32MK0 819 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 HES3Q5TGS1 186 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 KIAA1161Q6NSJ0 714 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 PLPP6Q8IY26 295 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 ITM2BQ9Y287 266 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 HS3ST3A1Q9Y663 406 aa24.95■■□□□ 1.58
LIME1-206ENST00000487026 TDRD6O60522 2096 aaKnown RBP24.95■■□□□ 1.58
LIME1-206ENST00000487026 TEX33O43247 280 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 AP1G1O43747 822 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 CREB3O43889 395 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 GSRP00390 522 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 UGT2B4P06133 528 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 CDK4P11802 303 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 HOXB3P14651 431 aaPredicted RBP24.94■■□□□ 1.58
LIME1-206ENST00000487026 EPHB2P29323 1055 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 HNF1BP35680 557 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 SNRPD1P62314 119 aaKnown RBP24.94■■□□□ 1.58
LIME1-206ENST00000487026 ZNF211Q13398 564 aaPredicted RBP24.94■■□□□ 1.58
LIME1-206ENST00000487026 COL28A1Q2UY09 1125 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 ZNF805Q5CZA5 627 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 EFHC2Q5JST6 749 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 CCDC183Q5T5S1 534 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 OR2AP1Q8NGE2 309 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 KLHL32Q96NJ5 620 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 FZD10Q9ULW2 581 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 CHD5Q8TDI0 1954 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 ADAMTS20P59510 1910 aa24.94■■□□□ 1.58
LIME1-206ENST00000487026 URB1O60287 2271 aaKnown RBP24.93■■□□□ 1.58
LIME1-206ENST00000487026 CACNA1GO43497 2377 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 CXorf51AA0A1B0GTR3 108 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 ANKRD62A6NC57 917 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 A6NNZ2 444 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 NEMP1O14524 444 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 POP4O95707 220 aaKnown RBP24.93■■□□□ 1.58
LIME1-206ENST00000487026 FERP16591 822 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 TYRO3Q06418 890 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 SGCGQ13326 291 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 PPP1R15BQ5SWA1 713 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 ACAD10Q6JQN1 1059 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 KDM7AQ6ZMT4 941 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 TMC6Q7Z403 805 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 IRF2BP2Q7Z5L9 587 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 MCOLN2Q8IZK6 566 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 RTL3Q8N8U3 475 aaKnown RBP24.93■■□□□ 1.58
LIME1-206ENST00000487026 BAP1Q92560 729 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 DNAJC28Q9NX36 388 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 TAS2R14Q9NYV8 317 aa24.93■■□□□ 1.58
LIME1-206ENST00000487026 TMCO5BA8MYB1 307 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 PIAS2O75928 621 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 TMCC1O94876 653 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 MYF5P13349 255 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 ACP1P24666 158 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 OGDHQ02218 1023 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 LRRC73Q5JTD7 316 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 DCUN1D2Q6PH85 259 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 OR4C6Q8NH72 309 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 HMCESQ96FZ2 354 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 LRIG1Q96JA1 1093 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 KLF6Q99612 283 aaPredicted RBP24.92■■□□□ 1.58
LIME1-206ENST00000487026 CNPY3Q9BT09 278 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 C1QTNF2Q9BXJ5 285 aa24.92■■□□□ 1.58
LIME1-206ENST00000487026 RASA4BC9J798 803 aa24.91■■□□□ 1.58
LIME1-206ENST00000487026 SPINT1O43278 529 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms