RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	IL21R	Q9HBE5	538 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	DNAAF2	Q9NVR5	837 aa	Known RBP	13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	NEU3	Q9UQ49	428 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	SAR1B	Q9Y6B6	198 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991		A0A1B0GVM2	712 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	TCAF2	A6NFQ2	919 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF487	B1APH4	448 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991		H0Y626	953 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	APOL1	O14791	398 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF185	O15231	689 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	CLDN11	O75508	207 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	LUC7L3	O95232	432 aa	Known RBP	13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	ACADM	P11310	421 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	POLR2E	P19388	210 aa	Known RBP	13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	PTPN7	P35236	360 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	CDH4	P55283	916 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	GRIK2	Q13002	908 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF177	Q13360	481 aa	Predicted RBP	13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	CAMK2G	Q13555	558 aa	Predicted RBP	13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	TFDP2	Q14188	446 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	TRIP6	Q15654	476 aa	Known RBP	13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	TAZ	Q16635	292 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	SYCP2L	Q5T4T6	812 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	CCDC181	Q5TID7	509 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	CXorf57	Q6NSI4	855 aa	Known RBP	13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	TMCO3	Q6UWJ1	677 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	MFN1	Q8IWA4	741 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	PQLC3	Q8N755	202 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF366	Q8N895	744 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	PRCC	Q92733	491 aa	Predicted RBP	13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	MS4A14	Q96JA4	679 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	CAPZA3	Q96KX2	299 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	MRGPRX3	Q96LB0	322 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	HERPUD2	Q9BSE4	406 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	MIR1-1HG	Q9H1L0	117 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	FBRS	Q9HAH7	460 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	PRDM16	Q9HAZ2	1276 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	ETNK2	Q9NVF9	386 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	USP36	Q9P275	1121 aa	Known RBP	13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	SUN2	Q9UH99	717 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	LHX6	Q9UPM6	363 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	MFHAS1	Q9Y4C4	1052 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	SLCO1B1	Q9Y6L6	691 aa		13.34	□□□□□ -0.27
NR1H3-223	ENST00000486991	ATRX	P46100	2492 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	CST8	O60676	142 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	URI1	O94763	535 aa	Predicted RBP	13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	FGG	P02679	453 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	CAPNS1	P04632	268 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	SYP	P08247	313 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	DLD	P09622	509 aa	Known RBP	13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	PRLR	P16471	622 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	ZFX	P17010	805 aa	Predicted RBP	13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	CD6	P30203	668 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	OXTR	P30559	389 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	OR1E1	P30953	314 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	CSK	P41240	450 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	ST8SIA6	P61647	398 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	BNC1	Q01954	994 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	ADCY2	Q08462	1091 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	LONRF2	Q1L5Z9	754 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	C19orf48	Q6RUI8	117 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	ADAT2	Q7Z6V5	191 aa	Known RBP	13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	SLCO6A1	Q86UG4	719 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	NLRP14	Q86W24	1093 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	MARCH9	Q86YJ5	346 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	ZCCHC9	Q8N567	271 aa	Known RBP	13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	RTL3	Q8N8U3	475 aa	Known RBP	13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	OR52K2	Q8NGK3	314 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	FOXJ1	Q92949	421 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	HAUS1	Q96CS2	278 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	TMEM248	Q9NWD8	314 aa		13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	WSB2	Q9NYS7	404 aa	Predicted RBP	13.33	□□□□□ -0.28
NR1H3-223	ENST00000486991	MEI4	A8MW99	385 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	WASH4P	A8MWX3	477 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	CES2	O00748	559 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	TJP3	O95049	919 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	IGLV3-19	P01714	112 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	ASL	P04424	464 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	EPHX1	P07099	455 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	RHOC	P08134	193 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	CTSO	P43234	321 aa	Predicted RBP	13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	MAPKAPK2	P49137	400 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	OXCT1	P55809	520 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	SFSWAP	Q12872	951 aa	Known RBP	13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	CDH18	Q13634	790 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	FNDC3B	Q53EP0	1204 aa	Known RBP	13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	PITRM1	Q5JRX3	1037 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	WDR45B	Q5MNZ6	344 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	NCBP2-AS2	Q69YL0	99 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	SLC9A4	Q6AI14	798 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	NPNT	Q6UXI9	565 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	BBS12	Q6ZW61	710 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	FAM124A	Q86V42	546 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	TMPRSS6	Q8IU80	811 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	NAXD	Q8IW45	347 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	RASGEF1C	Q8N431	466 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms