RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TNFSF13BQ9Y275 285 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 WDR81Q562E7 1941 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 ACOT8O14734 319 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 MAN1A2O60476 641 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 TADA2AO75478 443 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 PGK1P00558 417 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 PROZP22891 400 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 APLP1P51693 650 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 BCAT1P54687 386 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 TAS2R39P59534 338 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 FGD3Q5JSP0 725 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 LIPMQ5VYY2 423 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 STEAP4Q687X5 459 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 CENPLQ8N0S6 344 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-211ENST00000486901 ADCY4Q8NFM4 1077 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 SLCO4A1Q96BD0 722 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 ZFRQ96KR1 1074 aaKnown RBP12.53□□□□□ -0.4
HSPG2-211ENST00000486901 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 SEPHS2Q99611 448 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 HAUS8Q9BT25 410 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 CDHR5Q9HBB8 845 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 PFDN4Q9NQP4 134 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 OLAHQ9NV23 265 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 MYRFQ9Y2G1 1151 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 RBMX2Q9Y388 322 aaKnown RBP12.53□□□□□ -0.4
HSPG2-211ENST00000486901 LTBP4Q8N2S1 1624 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 PRSS51A0A1B0GVH4 220 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 BCAS2O75934 225 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-211ENST00000486901 ATE1O95260 518 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 H6PDO95479 791 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 SLC35E2BP0CK96 405 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 CD68P34810 354 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-211ENST00000486901 TNFAIP1Q13829 316 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 PAN2Q504Q3 1202 aaKnown RBP12.53□□□□□ -0.4
HSPG2-211ENST00000486901 CHSY3Q70JA7 882 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 C12orf43Q96C57 262 aaKnown RBP12.53□□□□□ -0.4
HSPG2-211ENST00000486901 PLEKHG4BQ96PX9 1271 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 MUC3BQ9H195 1237 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 C2orf40Q9H1Z8 148 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 VPS33BQ9H267 617 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 HOXC10Q9NYD6 342 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 CNOT6Q9ULM6 557 aaKnown RBP12.53□□□□□ -0.4
HSPG2-211ENST00000486901 PCDHGA7Q9Y5G6 932 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 GOLGA4Q13439 2230 aaKnown RBP12.52□□□□□ -0.4
HSPG2-211ENST00000486901 PSMD12O00232 456 aaPredicted RBP12.52□□□□□ -0.4
HSPG2-211ENST00000486901 FBP2O00757 339 aa12.52□□□□□ -0.4
HSPG2-211ENST00000486901 IL18RAPO95256 599 aa12.52□□□□□ -0.4
HSPG2-211ENST00000486901 PENKP01210 267 aaPredicted RBP12.52□□□□□ -0.4
HSPG2-211ENST00000486901 TPI1P60174 286 aa12.52□□□□□ -0.4
HSPG2-211ENST00000486901 GNA12Q03113 381 aa12.52□□□□□ -0.4
HSPG2-211ENST00000486901 VPS26BQ4G0F5 336 aa12.52□□□□□ -0.4
HSPG2-211ENST00000486901 ZNF470Q6ECI4 717 aa12.52□□□□□ -0.4
HSPG2-211ENST00000486901 TMEM110Q86TL2 294 aa12.52□□□□□ -0.4
HSPG2-211ENST00000486901 HEXDCQ8WVB3 486 aa12.52□□□□□ -0.4
HSPG2-211ENST00000486901 OSBPL2Q9H1P3 480 aa12.52□□□□□ -0.4
HSPG2-211ENST00000486901 RNF39Q9H2S5 420 aa12.52□□□□□ -0.4
HSPG2-211ENST00000486901 NDUFA13Q9P0J0 144 aa12.52□□□□□ -0.4
HSPG2-211ENST00000486901 IGKV6D-21A0A0A0MT36 114 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 MRASO14807 208 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 SUPT7LO94864 414 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 LRPAP1P30533 357 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 MAGEA6P43360 314 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 XIAPP98170 497 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 PIGFQ07326 219 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 CBX3Q13185 183 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 PSTKQ8IV42 348 aaKnown RBP12.52□□□□□ -0.41
HSPG2-211ENST00000486901 FIBCD1Q8N539 461 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 HMGCLL1Q8TB92 370 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 DRC3Q9H069 523 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 LRRC4Q9HBW1 653 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 ACOT9Q9Y305 439 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 SHROOM3Q8TF72 1996 aa12.52□□□□□ -0.41
HSPG2-211ENST00000486901 ZNF638Q14966 1978 aaKnown RBP12.52□□□□□ -0.41
HSPG2-211ENST00000486901 SDHDO14521 159 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 HTRA2O43464 458 aaPredicted RBP12.51□□□□□ -0.41
HSPG2-211ENST00000486901 DDHD2O94830 711 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 PCNAP12004 261 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 MYL4P12829 197 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 ATP6V1B2P21281 511 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 ABCD1P33897 745 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 SLC12A1Q13621 1099 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 TRIM25Q14258 630 aaKnown RBP12.51□□□□□ -0.41
HSPG2-211ENST00000486901 REP15Q6BDI9 236 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 DNAJB14Q8TBM8 379 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 SGCDQ92629 289 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 BRD8Q9H0E9 1235 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 STN1Q9H668 368 aaKnown RBP12.51□□□□□ -0.41
HSPG2-211ENST00000486901 ZNF696Q9H7X3 374 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 ELP3Q9H9T3 547 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 AS3MTQ9HBK9 375 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 DDIT4Q9NX09 232 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 SELENONQ9NZV5 590 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 CPA4Q9UI42 421 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 BTRCQ9Y297 605 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 FAM95CA0A1B0GW59 222 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 AGRPO00253 132 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 UBDO15205 165 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 USP17L7P0C7H9 530 aa12.51□□□□□ -0.41
HSPG2-211ENST00000486901 ALOX15P16050 662 aaPredicted RBP12.51□□□□□ -0.41
HSPG2-211ENST00000486901 RXRGP48443 463 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms