RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 VASPP50552 380 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-229ENST00000486665 CCINQ13939 588 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 GAS6Q14393 721 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 ZNF234Q14588 700 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 RFTN1Q14699 578 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-229ENST00000486665 DLG2Q15700 870 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 LPAL2Q16609 132 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 FNDC3BQ53EP0 1204 aaKnown RBP12.98□□□□□ -0.33
HDAC6-229ENST00000486665 C2orf27AQ580R0 203 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 NUDT18Q6ZVK8 323 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 ZNF366Q8N895 744 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 CEP112Q8N8E3 955 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 NOA1Q8NC60 698 aaKnown RBP12.98□□□□□ -0.33
HDAC6-229ENST00000486665 TSEN2Q8NCE0 465 aaKnown RBP12.98□□□□□ -0.33
HDAC6-229ENST00000486665 MNS1Q8NEH6 495 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 CCDC110Q8TBZ0 833 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 NSMCE1Q8WV22 266 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 UCMAQ8WVF2 138 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 RTP4Q96DX8 246 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 TEKT5Q96M29 485 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 CCDC114Q96M63 670 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 NSMCE3Q96MG7 304 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 TNKS2Q9H2K2 1166 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 NT5MQ9NPB1 228 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 LHX3Q9UBR4 397 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 SEPT3Q9UH03 358 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 PCYOX1Q9UHG3 505 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 AMACRQ9UHK6 382 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 ATP8A1Q9Y2Q0 1164 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 NEU2Q9Y3R4 380 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 CACNA1BQ00975 2339 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 ZFHX4Q86UP3 3567 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 CTAGE15A4D2H0 777 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 CFAP69A5D8W1 941 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 MTSS1O43312 755 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 GCATO75600 419 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 IFNB1P01574 187 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 CTAGE8P0CG41 777 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 HLA-EP13747 358 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 PRKCHP24723 683 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 RPL22P35268 128 aaKnown RBP12.97□□□□□ -0.33
HDAC6-229ENST00000486665 MAGEA9P43362 315 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 GEMIN4P57678 1058 aaKnown RBP12.97□□□□□ -0.33
HDAC6-229ENST00000486665 MAXP61244 160 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 DMWDQ09019 674 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 NIPAL4Q0D2K0 466 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 IHHQ14623 411 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 TRIP13Q15645 432 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-229ENST00000486665 ACCSLQ4AC99 568 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 ANKRD20A2Q5SQ80 823 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 ATXN7L2Q5T6C5 722 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-229ENST00000486665 ANKRD20A1Q5TYW2 823 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 ANKRD20A3Q5VUR7 823 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 GSTA5Q7RTV2 222 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 PID1Q7Z2X4 250 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 CTAGE6Q86UF2 777 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 CTAGE4Q8IX94 777 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 MMGT1Q8N4V1 131 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 ZNF513Q8N8E2 541 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-229ENST00000486665 CASKIN2Q8WXE0 1202 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 EXOC2Q96KP1 924 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 SPATA13Q96N96 652 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 PSKH2Q96QS6 385 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 CINPQ9BW66 212 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-229ENST00000486665 CHRDQ9H2X0 955 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 TMEM245Q9H330 911 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 LMAN1LQ9HAT1 526 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 C2orf42Q9NWW7 574 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 CACNA2D2Q9NY47 1150 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 KLHL8Q9P2G9 620 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-229ENST00000486665 STON1Q9Y6Q2 735 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 ACACBO00763 2458 aa12.97□□□□□ -0.33
HDAC6-229ENST00000486665 F5H423 210 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-229ENST00000486665 INSIG1O15503 277 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 TTI1O43156 1089 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 RAD51CO43502 376 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 RNF40O75150 1001 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 METTL18O95568 372 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 KRT14P02533 472 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 ST8SIA6P61647 398 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 DR1Q01658 176 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 SATB1Q01826 763 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 LMNB2Q03252 620 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 ITKQ08881 620 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 ENPP2Q13822 863 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 ZNF235Q14590 738 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 C22orf39Q6P5X5 142 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 PKN3Q6P5Z2 889 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 TAB3Q8N5C8 712 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-229ENST00000486665 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.33
HDAC6-229ENST00000486665 KDM1BQ8NB78 822 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 KCNV2Q8TDN2 545 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 PTPRN2Q92932 1015 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 SLCO2A1Q92959 643 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 VOPP1Q96AW1 172 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 ISG20Q96AZ6 181 aaKnown RBP12.96□□□□□ -0.33
HDAC6-229ENST00000486665 ERLEC1Q96DZ1 483 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 CNTNAP3BQ96NU0 1288 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 NELL2Q99435 816 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 VAT1Q99536 393 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms