RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 PPM1MQ96MI6 270 aa6.47□□□□□ -1.37
RTN4-214ENST00000486085 CLSTN3Q9BQT9 956 aa6.47□□□□□ -1.37
RTN4-214ENST00000486085 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.47□□□□□ -1.37
RTN4-214ENST00000486085 IFT27Q9BW83 186 aa6.47□□□□□ -1.37
RTN4-214ENST00000486085 KRTAP4-2Q9BYR5 136 aa6.47□□□□□ -1.37
RTN4-214ENST00000486085 HIPK3Q9H422 1215 aa6.47□□□□□ -1.37
RTN4-214ENST00000486085 UBN1Q9NPG3 1134 aa6.47□□□□□ -1.37
RTN4-214ENST00000486085 TBX20Q9UMR3 447 aa6.47□□□□□ -1.37
RTN4-214ENST00000486085 ARHGAP26Q9UNA1 814 aa6.47□□□□□ -1.37
RTN4-214ENST00000486085 NPHP4O75161 1426 aaPredicted RBP6.47□□□□□ -1.37
RTN4-214ENST00000486085 FAM135BQ49AJ0 1406 aa6.47□□□□□ -1.37
RTN4-214ENST00000486085 XRN1Q8IZH2 1706 aaKnown RBP6.47□□□□□ -1.37
RTN4-214ENST00000486085 ADGRF5Q8IZF2 1346 aa6.47□□□□□ -1.37
RTN4-214ENST00000486085 ZNF335Q9H4Z2 1342 aaPredicted RBP6.47□□□□□ -1.37
RTN4-214ENST00000486085 NKTRP30414 1462 aaKnown RBP6.47□□□□□ -1.37
RTN4-214ENST00000486085 LRPPRCP42704 1394 aaKnown RBP6.46□□□□□ -1.37
RTN4-214ENST00000486085 TRBV5-3A0A0A0MS03 114 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 TARSL2A2RTX5 802 aaKnown RBP6.46□□□□□ -1.38
RTN4-214ENST00000486085 OR6C68A6NDL8 312 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 TULP3O75386 442 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 SKIV2L2P42285 1042 aaKnown RBP6.46□□□□□ -1.38
RTN4-214ENST00000486085 GALNT2Q10471 571 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 TBX2Q13207 712 aaPredicted RBP6.46□□□□□ -1.38
RTN4-214ENST00000486085 GPR68Q15743 365 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 FBXO43Q4G163 708 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 TTC39AQ5SRH9 613 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 TMEM268Q5VZI3 342 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 TTLL5Q6EMB2 1281 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 DEF8Q6ZN54 512 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 IGFN1Q86VF2 1251 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 RFWD2Q8NHY2 731 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 ST8SIA4Q92187 359 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 ZBTB10Q96DT7 871 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 CLMNQ96JQ2 1002 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 LMAN2LQ9H0V9 348 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 THSD1Q9NS62 852 aa6.46□□□□□ -1.38
RTN4-214ENST00000486085 AGO2Q9UKV8 859 aaKnown RBP6.46□□□□□ -1.38
RTN4-214ENST00000486085 SH3BP5O60239 455 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 GUCY1B2O75343 617 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 LCKP06239 509 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 ATP1A3P13637 1013 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 MMP13P45452 471 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 RPP30P78346 268 aaKnown RBP6.45□□□□□ -1.38
RTN4-214ENST00000486085 MRPS21P82921 87 aaKnown RBP6.45□□□□□ -1.38
RTN4-214ENST00000486085 SLC18A3Q16572 532 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 SMTNL2Q2TAL5 461 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 ALG10Q5BKT4 473 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 ALG10BQ5I7T1 473 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 ENTPD8Q5MY95 495 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 HMBOX1Q6NT76 420 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 AAGABQ6PD74 315 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.45□□□□□ -1.38
RTN4-214ENST00000486085 GHDCQ8N2G8 530 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 TCP11L2Q8N4U5 519 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 SLC44A5Q8NCS7 719 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 CNOT9Q92600 299 aaKnown RBP6.45□□□□□ -1.38
RTN4-214ENST00000486085 RNF125Q96EQ8 232 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 PAIP1Q9H074 479 aaKnown RBP6.45□□□□□ -1.38
RTN4-214ENST00000486085 TRNAU1APQ9NX07 287 aaKnown RBP6.45□□□□□ -1.38
RTN4-214ENST00000486085 NLKQ9UBE8 527 aa6.45□□□□□ -1.38
RTN4-214ENST00000486085 CHD2O14647 1828 aaKnown RBP6.45□□□□□ -1.38
RTN4-214ENST00000486085 ADGRB2O60241 1585 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 YTHDC2Q9H6S0 1430 aaKnown RBP6.44□□□□□ -1.38
RTN4-214ENST00000486085 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 A0A1W2PPC1 479 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 WDR91A4D1P6 747 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 PER2O15055 1255 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 WDHD1O75717 1129 aaPredicted RBP6.44□□□□□ -1.38
RTN4-214ENST00000486085 DDAH2O95865 285 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 GGT5P36269 586 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 NR1H2P55055 460 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 CDH15P55291 814 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 MORN5Q5VZ52 161 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 CMASQ8NFW8 434 aaPredicted RBP6.44□□□□□ -1.38
RTN4-214ENST00000486085 FAR1Q8WVX9 515 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 HSPH1Q92598 858 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 ELP4Q96EB1 424 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 APOPT1Q96IL0 206 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 FRG2BQ96QU4 278 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 EYA3Q99504 573 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 SLC26A6Q9BXS9 759 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 INTS2Q9H0H0 1204 aaKnown RBP6.44□□□□□ -1.38
RTN4-214ENST00000486085 TTYH1Q9H313 450 aaPredicted RBP6.44□□□□□ -1.38
RTN4-214ENST00000486085 SLC32A1Q9H598 525 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 ACTR5Q9H9F9 607 aaPredicted RBP6.44□□□□□ -1.38
RTN4-214ENST00000486085 SPAG4Q9NPE6 437 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 CDH22Q9UJ99 828 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 ANAPC4Q9UJX5 808 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 ZNF804BA4D1E1 1349 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 EIF3AQ14152 1382 aaKnown RBP6.44□□□□□ -1.38
RTN4-214ENST00000486085 ZMYM2Q9UBW7 1377 aa6.44□□□□□ -1.38
RTN4-214ENST00000486085 ARHGEF28Q8N1W1 1705 aaKnown RBP6.43□□□□□ -1.38
RTN4-214ENST00000486085 J3KRW8 73 aa6.43□□□□□ -1.38
RTN4-214ENST00000486085 IL1AP01583 271 aa6.43□□□□□ -1.38
RTN4-214ENST00000486085 CHRM4P08173 479 aa6.43□□□□□ -1.38
RTN4-214ENST00000486085 FBLP22087 321 aaKnown RBP6.43□□□□□ -1.38
RTN4-214ENST00000486085 SLC16A2P36021 539 aa6.43□□□□□ -1.38
RTN4-214ENST00000486085 GPD2P43304 727 aa6.43□□□□□ -1.38
RTN4-214ENST00000486085 SSBP2P81877 361 aaPredicted RBP6.43□□□□□ -1.38
RTN4-214ENST00000486085 GAD2Q05329 585 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms