RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 CCDC117Q8IWD4 279 aaPredicted RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 PPIL6Q8IXY8 311 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 YAF2Q8IY57 180 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 TAB3Q8N5C8 712 aaPredicted RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 NAT16Q8N8M0 369 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 TSEN2Q8NCE0 465 aaKnown RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 ARRDC2Q8TBH0 407 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 TTC17Q96AE7 1141 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 VOPP1Q96AW1 172 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 MYO19Q96H55 970 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 OXNAD1Q96HP4 312 aaPredicted RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 NSMCE3Q96MG7 304 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 GDAP1L1Q96MZ0 367 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 ZIM3Q96PE6 472 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 PSKH2Q96QS6 385 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 XPO6Q96QU8 1125 aaKnown RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 FERMT1Q9BQL6 677 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 C2orf49Q9BVC5 232 aaPredicted RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 FOXP3Q9BZS1 431 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 GLOD4Q9HC38 313 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 TRPV5Q9NQA5 729 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 EIF2B3Q9NR50 452 aaKnown RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 DNAJC17Q9NVM6 304 aaKnown RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 UBA2Q9UBT2 640 aaPredicted RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 FAM153AQ9UHL3 310 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 SHOC2Q9UQ13 582 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 ZNF821O75541 412 aaPredicted RBP11.49□□□□□ -0.57
SND1-212ENST00000485871 TMCC1O94876 653 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 MT-CO1P00395 513 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
SND1-212ENST00000485871 ACTN2P35609 894 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 EIF2DP41214 584 aaKnown RBP11.49□□□□□ -0.57
SND1-212ENST00000485871 CTSOP43234 321 aaPredicted RBP11.49□□□□□ -0.57
SND1-212ENST00000485871 SERPINH1P50454 418 aaKnown RBP11.49□□□□□ -0.57
SND1-212ENST00000485871 MAXP61244 160 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 BASP1P80723 227 aaKnown RBP11.49□□□□□ -0.57
SND1-212ENST00000485871 MORF4L2Q15014 288 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 ITPRIPL2Q3MIP1 535 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 MBLAC2Q68D91 279 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 NAIF1Q69YI7 327 aaPredicted RBP11.49□□□□□ -0.57
SND1-212ENST00000485871 ITPRIPL1Q6GPH6 555 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 PCGF5Q86SE9 256 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 PRPF39Q86UA1 669 aaKnown RBP11.49□□□□□ -0.57
SND1-212ENST00000485871 ZNF354CQ86Y25 554 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 AHI1Q8N157 1196 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 ARFGAP2Q8N6H7 521 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 WFIKKN2Q8TEU8 576 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 NXPE3Q969Y0 559 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 IMP4Q96G21 291 aaKnown RBP11.49□□□□□ -0.57
SND1-212ENST00000485871 MRGPRX3Q96LB0 322 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 TXLNGYQ9BZA5 131 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 SLC25A51Q9H1U9 297 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 KCNK12Q9HB15 430 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 NT5MQ9NPB1 228 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.49□□□□□ -0.57
SND1-212ENST00000485871 PRKAG3Q9UGI9 489 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 SEPT3Q9UH03 358 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 RSPH14Q9UHP6 348 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 HS3ST2Q9Y278 367 aa11.49□□□□□ -0.57
SND1-212ENST00000485871 CKAP5Q14008 2032 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 LOC730098B7Z3J9 87 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 PRRT4C9JH25 899 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 K7ERQ8 282 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 SMAPO00193 183 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 GJB3O75712 270 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 SUN1O94901 812 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 AP2A1O95782 977 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 NUDT17P0C025 328 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 MYZAPP0CAP1 466 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 SRCP12931 536 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 HSD17B3P37058 310 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 MAGEA3P43357 314 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 STK19P49842 368 aaPredicted RBP11.48□□□□□ -0.57
SND1-212ENST00000485871 PLTPP55058 493 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 SKOR1P84550 965 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 DSC2Q02487 901 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 ZP2Q05996 745 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 DHX9Q08211 1270 aaKnown RBP11.48□□□□□ -0.57
SND1-212ENST00000485871 SLC20A2Q08357 652 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 NR1H3Q13133 447 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 SLC14A2Q15849 920 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 AGBL2Q5U5Z8 902 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 EMC10Q5UCC4 262 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 RETSATQ6NUM9 610 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 KDELC1Q6UW63 502 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 SFTPA1Q8IWL2 248 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 ADHFE1Q8IWW8 467 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 SLC44A3Q8N4M1 653 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 MCUQ8NE86 351 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 SPATA22Q8NHS9 363 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 NSMCE1Q8WV22 266 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 PWWP2AQ96N64 755 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 PRRX2Q99811 253 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 ANAPC5Q9UJX4 755 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 HCN2Q9UL51 889 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 PLAAQ9Y263 795 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 WDFY4Q6ZS81 3184 aa11.48□□□□□ -0.57
SND1-212ENST00000485871 SHISA7A6NL88 538 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 E7ESA3 106 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms