RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 FZD2Q14332 565 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 ARL13BQ3SXY8 428 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 DCP2Q8IU60 420 aaKnown RBP19.57■□□□□ 0.72
COL27A1-205ENST00000485397 SNIP1Q8TAD8 396 aaKnown RBP19.57■□□□□ 0.72
COL27A1-205ENST00000485397 FAM174AQ8TBP5 190 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 FGF11Q92914 225 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 VOPP1Q96AW1 172 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 OSBPL2Q9H1P3 480 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 NLRC4Q9NPP4 1024 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 GGT7Q9UJ14 662 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 ITM2BQ9Y287 266 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 U3KQA8 63 aa19.57■□□□□ 0.72
COL27A1-205ENST00000485397 IGSF10Q6WRI0 2623 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 NEMP2A6NFY4 417 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 EIF4E1BA6NMX2 242 aaKnown RBP19.56■□□□□ 0.72
COL27A1-205ENST00000485397 C16orf96A6NNT2 1141 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 K7ESM1 405 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 SCAMP1O15126 338 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 EPHB6O15197 1021 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 RRP8O43159 456 aaKnown RBP19.56■□□□□ 0.72
COL27A1-205ENST00000485397 OPA1O60313 960 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 LRIG2O94898 1065 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 ALPPL2P10696 532 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 MAPKAPK2P49137 400 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 POLR2FP61218 127 aaKnown RBP19.56■□□□□ 0.72
COL27A1-205ENST00000485397 HNRNPKP61978 463 aaKnown RBP eCLIP19.56■□□□□ 0.725e-7■■■■■ 29.4
COL27A1-205ENST00000485397 TPRG1LQ5T0D9 272 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 CDCP2Q5VXM1 449 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 PLPP6Q8IY26 295 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 CCDC185Q8N715 623 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 ISG20Q96AZ6 181 aaKnown RBP19.56■□□□□ 0.72
COL27A1-205ENST00000485397 PCDHB18PQ96TA0 734 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 KLF6Q99612 283 aaPredicted RBP19.56■□□□□ 0.72
COL27A1-205ENST00000485397 C1QTNF2Q9BXJ5 285 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 PRORYQ9H606 182 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 FAM207AQ9NSI2 230 aaPredicted RBP19.56■□□□□ 0.72
COL27A1-205ENST00000485397 TMEM248Q9NWD8 314 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 KLF15Q9UIH9 416 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 NEU3Q9UQ49 428 aa19.56■□□□□ 0.72
COL27A1-205ENST00000485397 SPTY2D1-AS1A0A0U1RR47 76 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 SPINT1O43278 529 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 CSF2P04141 144 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 ACTN2P35609 894 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 SOX5P35711 763 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 ETFBP38117 255 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 RABIFP47224 123 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 HDAC4P56524 1084 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 JAM2P57087 298 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 PTP4A2Q12974 167 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 SGCGQ13326 291 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 KRT31Q15323 416 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 TBC1D25Q3MII6 688 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 ZNF805Q5CZA5 627 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 CT47A1Q5JQC4 288 aaPredicted RBP19.55■□□□□ 0.72
COL27A1-205ENST00000485397 FAM181AQ8N9Y4 354 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 ZNF548Q8NEK5 533 aaPredicted RBP19.55■□□□□ 0.72
COL27A1-205ENST00000485397 BAP1Q92560 729 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 TBC1D31Q96DN5 1066 aa19.55■□□□□ 0.72
COL27A1-205ENST00000485397 IPO11Q9UI26 975 aaKnown RBP19.55■□□□□ 0.72
COL27A1-205ENST00000485397 CXorf51AA0A1B0GTR3 108 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 KRIT1O00522 736 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 NEMP1O14524 444 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 FPGTO14772 594 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 TSPAN6O43657 245 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 GSRP00390 522 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 UGT2B4P06133 528 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 PLEKP08567 350 aaPredicted RBP19.54■□□□□ 0.72
COL27A1-205ENST00000485397 NME1P15531 152 aaKnown RBP19.54■□□□□ 0.72
COL27A1-205ENST00000485397 PTPN9P43378 593 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 CCDC173Q0VFZ6 552 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 PDE1CQ14123 709 aaPredicted RBP19.54■□□□□ 0.72
COL27A1-205ENST00000485397 POLD3Q15054 466 aaPredicted RBP19.54■□□□□ 0.72
COL27A1-205ENST00000485397 MYLK3Q32MK0 819 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 ATXN7L2Q5T6C5 722 aaPredicted RBP19.54■□□□□ 0.72
COL27A1-205ENST00000485397 STRADAQ7RTN6 431 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 PARGQ86W56 976 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 NETO2Q8NC67 525 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 OR2AP1Q8NGE2 309 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 ENOX1Q8TC92 643 aaKnown RBP19.54■□□□□ 0.72
COL27A1-205ENST00000485397 FAM172AQ8WUF8 416 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 CENPIQ92674 756 aaPredicted RBP19.54■□□□□ 0.72
COL27A1-205ENST00000485397 RAB7BQ96AH8 199 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 KLHL32Q96NJ5 620 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 LENG8Q96PV6 779 aaPredicted RBP19.54■□□□□ 0.72
COL27A1-205ENST00000485397 UBL7Q96S82 380 aaPredicted RBP19.54■□□□□ 0.72
COL27A1-205ENST00000485397 DUSP23Q9BVJ7 150 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 MAGEH1Q9H213 219 aa19.54■□□□□ 0.72
COL27A1-205ENST00000485397 RAMP2O60895 175 aa19.53■□□□□ 0.72
COL27A1-205ENST00000485397 KRT3P12035 628 aa19.53■□□□□ 0.72
COL27A1-205ENST00000485397 UNGP13051 313 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-205ENST00000485397 RFC1P35251 1148 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-205ENST00000485397 DUSP3P51452 185 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-205ENST00000485397 SNRPD1P62314 119 aaKnown RBP19.53■□□□□ 0.72
COL27A1-205ENST00000485397 EIF2B5Q13144 721 aaKnown RBP19.53■□□□□ 0.72
COL27A1-205ENST00000485397 LRRC73Q5JTD7 316 aa19.53■□□□□ 0.72
COL27A1-205ENST00000485397 CDKAL1Q5VV42 579 aa19.53■□□□□ 0.72
COL27A1-205ENST00000485397 IFI44Q8TCB0 444 aa19.53■□□□□ 0.72
COL27A1-205ENST00000485397 RETREG1Q9H6L5 497 aa19.53■□□□□ 0.72
COL27A1-205ENST00000485397 ADAM22Q9P0K1 906 aa19.53■□□□□ 0.72
COL27A1-205ENST00000485397 HPCAL4Q9UM19 191 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms