RNA–Protein interactions for RNA: ENST00000484913.5

PEX1-208, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 4,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-208ENST00000484913 FRMD8Q9BZ67 464 aaPredicted RBP11.3□□□□□ -0.6
PEX1-208ENST00000484913 MICAL3Q7RTP6 2002 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 MT-CO1P00395 513 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 NR1H3Q13133 447 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 TMCO4Q5TGY1 634 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 PACS1Q6VY07 963 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 GRIN3AQ8TCU5 1115 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 GDPD5Q8WTR4 605 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 ZFYVE19Q96K21 471 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 PRICKLE1Q96MT3 831 aaPredicted RBP11.3□□□□□ -0.6
PEX1-208ENST00000484913 BBS2Q9BXC9 721 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 FAM96AQ9H5X1 160 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 SLC8A1P32418 973 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 BMPR1AP36894 532 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 CSE1LP55060 971 aaKnown RBP11.3□□□□□ -0.6
PEX1-208ENST00000484913 WDR4P57081 412 aaKnown RBP11.3□□□□□ -0.6
PEX1-208ENST00000484913 GPM6BQ13491 265 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 TAS2R42Q7RTR8 314 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 VSIG1Q86XK7 387 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 NUDCD3Q8IVD9 361 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 RIBC1Q8N443 379 aaPredicted RBP11.3□□□□□ -0.6
PEX1-208ENST00000484913 ZNF689Q96CS4 500 aaPredicted RBP11.3□□□□□ -0.6
PEX1-208ENST00000484913 SEC16BQ96JE7 1060 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 DDX50Q9BQ39 737 aaKnown RBP11.3□□□□□ -0.6
PEX1-208ENST00000484913 TLE6Q9H808 572 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 TMEM248Q9NWD8 314 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 PSD3Q9NYI0 1048 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 PCDHB9Q9Y5E1 797 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 ARL5AQ9Y689 179 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 E7ESA3 106 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 TRIM24O15164 1050 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 ABLIM3O94929 683 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 DNAJB1P25685 340 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 NRIP1P48552 1158 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 SLC41A1Q8IVJ1 513 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 ZBP1Q9H171 429 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 NOD2Q9HC29 1040 aa11.3□□□□□ -0.6
PEX1-208ENST00000484913 EVLQ9UI08 416 aaPredicted RBP11.3□□□□□ -0.6
PEX1-208ENST00000484913 A0A1B0GVM2 712 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 TCAF2A6NFQ2 919 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 ZNF487B1APH4 448 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 MUSKO15146 869 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 BAIAP3O94812 1187 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 FAM107AO95990 144 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 RGRP47804 291 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 SERPINH1P50454 418 aaKnown RBP11.29□□□□□ -0.6
PEX1-208ENST00000484913 ZNF135P52742 658 aaPredicted RBP11.29□□□□□ -0.6
PEX1-208ENST00000484913 CHI3L2Q15782 390 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 ARHGAP15Q53QZ3 475 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 N4BP2L1Q5TBK1 243 aaPredicted RBP11.29□□□□□ -0.6
PEX1-208ENST00000484913 GET4Q7L5D6 327 aaPredicted RBP11.29□□□□□ -0.6
PEX1-208ENST00000484913 BNIPLQ7Z465 357 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 WFDC5Q8TCV5 224 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 SMG7Q92540 1137 aaKnown RBP11.29□□□□□ -0.6
PEX1-208ENST00000484913 HDAC10Q969S8 669 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 MOCOSQ96EN8 888 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 IL22Q9GZX6 179 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 ITGA2BP08514 1039 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 STK19P49842 368 aaPredicted RBP11.29□□□□□ -0.6
PEX1-208ENST00000484913 CDK16Q00536 496 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 ADGRD1Q6QNK2 874 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 OR13C4Q8NGS5 318 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 TASP1Q9H6P5 420 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 ZNF395Q9H8N7 513 aaPredicted RBP11.29□□□□□ -0.6
PEX1-208ENST00000484913 ABCB8Q9NUT2 735 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 SEPT3Q9UH03 358 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 SMG5Q9UPR3 1016 aaKnown RBP11.29□□□□□ -0.6
PEX1-208ENST00000484913 MTO1Q9Y2Z2 717 aaKnown RBP11.29□□□□□ -0.6
PEX1-208ENST00000484913 LINC01553A4QN01 128 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 C2orf71A6NGG8 1288 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 CLDN11O75508 207 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 RHOP08100 348 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 PAMP19021 973 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 FOXN2P32314 431 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 SERINC3Q13530 473 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 FASTKD1Q53R41 847 aaKnown RBP11.29□□□□□ -0.6
PEX1-208ENST00000484913 TRIM68Q6AZZ1 485 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 CDHR3Q6ZTQ4 885 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 CCDC91Q7Z6B0 441 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 CRIPAKQ8N1N5 446 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 CCNYL1Q8N7R7 359 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 CLEC4EQ9ULY5 219 aa11.29□□□□□ -0.6
PEX1-208ENST00000484913 NRG2O14511 850 aaPredicted RBP11.28□□□□□ -0.6
PEX1-208ENST00000484913 PRSS56P0CW18 603 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 ITGB6P18564 788 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 CCR2P41597 374 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 NDST2P52849 883 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 CDH4P55283 916 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 HNRNPDQ14103 355 aaKnown RBP11.28□□□□□ -0.6
PEX1-208ENST00000484913 ZRANB3Q5FWF4 1079 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 FYB2Q5VWT5 728 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 ZNF449Q6P9G9 518 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 TCEAL8Q8IYN2 117 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 APCDD1Q8J025 514 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 ATXN2LQ8WWM7 1075 aaKnown RBP11.28□□□□□ -0.6
PEX1-208ENST00000484913 SORCS1Q8WY21 1168 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 LRRC39Q96DD0 335 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 MRGPRX2Q96LB1 330 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 RILPQ96NA2 401 aa11.28□□□□□ -0.6
PEX1-208ENST00000484913 HTATIP2Q9BUP3 242 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms