RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 FOXC1Q12948 553 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 PARP15Q460N3 678 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 LRRC73Q5JTD7 316 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 SEL1L3Q68CR1 1132 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 NAPEPLDQ6IQ20 393 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 IL27RAQ6UWB1 636 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 ARHGAP36Q6ZRI8 547 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 TRIM69Q86WT6 500 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 NAXDQ8IW45 347 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 TP53INP2Q8IXH6 220 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 OR8K1Q8NGG5 319 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 ZNF564Q8TBZ8 553 aaPredicted RBP12.48□□□□□ -0.41
MSH5-216ENST00000484309 SETD7Q8WTS6 366 aaKnown RBP12.48□□□□□ -0.41
MSH5-216ENST00000484309 ISG20Q96AZ6 181 aaKnown RBP12.48□□□□□ -0.41
MSH5-216ENST00000484309 DNAJC7Q99615 494 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 CHP1Q99653 195 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 KDM4CQ9H3R0 1056 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 LRRC19Q9H756 370 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 PREBQ9HCU5 417 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 FZD3Q9NPG1 666 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 ABHD10Q9NUJ1 306 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.48□□□□□ -0.41
MSH5-216ENST00000484309 CWC15Q9P013 229 aaKnown RBP12.48□□□□□ -0.41
MSH5-216ENST00000484309 CTTNBP2NLQ9P2B4 639 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 LHX3Q9UBR4 397 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 UBA2Q9UBT2 640 aaPredicted RBP12.48□□□□□ -0.41
MSH5-216ENST00000484309 IP6K2Q9UHH9 426 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 ITM2BQ9Y287 266 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 PTPRBP23467 1997 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 TPRP12270 2363 aaKnown RBP12.48□□□□□ -0.41
MSH5-216ENST00000484309 CHD8Q9HCK8 2581 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 A0A1W2PR77 199 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 TMEM110-MUSTN1A8MSY1 372 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 EIF3CLB5ME19 914 aaKnown RBP12.47□□□□□ -0.41
MSH5-216ENST00000484309 VILLO15195 856 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 SLC31A1O15431 190 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 INSIG1O15503 277 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 AKR1B10O60218 316 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 IGSF6O95976 241 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 TOP3BO95985 862 aaKnown RBP12.47□□□□□ -0.41
MSH5-216ENST00000484309 RARAP10276 462 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 ADRB3P13945 408 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 AMPD1P23109 780 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 HTR7P34969 479 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 ABL2P42684 1182 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 NDST2P52849 883 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 SIM1P81133 766 aaPredicted RBP12.47□□□□□ -0.41
MSH5-216ENST00000484309 SLC25A11Q02978 314 aaKnown RBP12.47□□□□□ -0.41
MSH5-216ENST00000484309 DPYSQ14117 519 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 PIGHQ14442 188 aaPredicted RBP12.47□□□□□ -0.41
MSH5-216ENST00000484309 CYTH1Q15438 398 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 SLC18A3Q16572 532 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 MYLK3Q32MK0 819 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 SETMARQ53H47 684 aaPredicted RBP12.47□□□□□ -0.41
MSH5-216ENST00000484309 FBXL19Q6PCT2 694 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 ARHGAP12Q8IWW6 846 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 VOPP1Q96AW1 172 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 GDAP1L1Q96MZ0 367 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 KLHL32Q96NJ5 620 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 EIF3CQ99613 913 aaKnown RBP12.47□□□□□ -0.41
MSH5-216ENST00000484309 HDAC8Q9BY41 377 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 PDFQ9HBH1 243 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 SPTLC3Q9NUV7 552 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 ETNK2Q9NVF9 386 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 ZNHIT6Q9NWK9 470 aaKnown RBP12.47□□□□□ -0.41
MSH5-216ENST00000484309 GGT7Q9UJ14 662 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 ZFR2Q9UPR6 939 aaKnown RBP12.47□□□□□ -0.41
MSH5-216ENST00000484309 BTBD3Q9Y2F9 522 aa12.47□□□□□ -0.41
MSH5-216ENST00000484309 ARID1BQ8NFD5 2236 aaPredicted RBP12.46□□□□□ -0.41
MSH5-216ENST00000484309 CXorf51AA0A1B0GTR3 108 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 ARHGAP42A6NI28 874 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 C16orf96A6NNT2 1141 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 UPK3BL1B0FP48 263 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 UPK3BL2E5RIL1 263 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 H3BRJ5 948 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 MYO1FO00160 1098 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 PRAMEF11O60813 436 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 PIGNO95427 931 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 POP4O95707 220 aaKnown RBP12.46□□□□□ -0.41
MSH5-216ENST00000484309 SPINK2P20155 84 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 ARL4AP40617 200 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 CCT8P50990 548 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 CCDC15Q0P6D6 951 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 SLC14A1Q13336 389 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 ACAP1Q15027 740 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 DPYSL2Q16555 572 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 ZNF423Q2M1K9 1284 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 TSR1Q2NL82 804 aaKnown RBP12.46□□□□□ -0.41
MSH5-216ENST00000484309 ASTE1Q2TB18 679 aaPredicted RBP12.46□□□□□ -0.41
MSH5-216ENST00000484309 HORMAD1Q86X24 394 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 PSTKQ8IV42 348 aaKnown RBP12.46□□□□□ -0.41
MSH5-216ENST00000484309 NIPA2Q8N8Q9 360 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 CTNNBL1Q8WYA6 563 aaPredicted RBP12.46□□□□□ -0.41
MSH5-216ENST00000484309 NCAPGQ9BPX3 1015 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 TRIM5Q9C035 493 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 SP110Q9HB58 689 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 PCDH18Q9HCL0 1135 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 KLHL11Q9NVR0 708 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 PCDHB9Q9Y5E1 797 aa12.46□□□□□ -0.41
MSH5-216ENST00000484309 MAP1BP46821 2468 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms