RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 BCAS4Q8TDM0 211 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 CKAP2Q8WWK9 683 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 SERAC1Q96JX3 654 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 SEMA3CQ99985 751 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 SPON2Q9BUD6 331 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 TASP1Q9H6P5 420 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 NKIRAS1Q9NYS0 192 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 SH3BP1Q9Y3L3 701 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 MYLKQ15746 1914 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 E2F8A0AVK6 867 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 TRIM49D1C9J1S8 452 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 SPAG7O75391 227 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 RFPL1O75677 317 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 RHOP08100 348 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 CES1P23141 567 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 GLDCP23378 1020 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 GPM6BQ13491 265 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 FSCBQ5H9T9 825 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 PRSS36Q5K4E3 855 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 GPR158Q5T848 1215 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 ZNF771Q7L3S4 317 aaPredicted RBP14.23□□□□□ -0.13
CLK3-204ENST00000483723 ANKRD42Q8N9B4 389 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 TCEAL4Q96EI5 215 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 CCT8L2Q96SF2 557 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 FEM1AQ9BSK4 669 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 FSD1LQ9BXM9 530 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 HAUS2Q9NVX0 235 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 ZDHHC7Q9NXF8 308 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 TCAF1Q9Y4C2 921 aa14.23□□□□□ -0.13
CLK3-204ENST00000483723 TYW5A2RUC4 315 aaKnown RBP14.22□□□□□ -0.13
CLK3-204ENST00000483723 H0Y626 953 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 ZWINTO95229 277 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 FAM107AO95990 144 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 ERVK-10P10266 1014 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 CCNFP41002 786 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 CHRNA4P43681 627 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 ARF5P84085 180 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 ZNF235Q14590 738 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 SLC1A5Q15758 541 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 MPPE1Q53F39 396 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 INO80DQ53TQ3 878 aaPredicted RBP14.22□□□□□ -0.13
CLK3-204ENST00000483723 TEDDM1Q5T9Z0 273 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 FYB2Q5VWT5 728 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 BBS7Q8IWZ6 715 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 CMTM8Q8IZV2 173 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 TDRD5Q8NAT2 981 aaKnown RBP14.22□□□□□ -0.13
CLK3-204ENST00000483723 FEM1CQ96JP0 617 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 ZNF778Q96MU6 729 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 CPNE1Q99829 537 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 MCMBPQ9BTE3 642 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 PRKD2Q9BZL6 878 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 TREX1Q9NSU2 369 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 MKS1Q9NXB0 559 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 DPP7Q9UHL4 492 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 ZMYM5Q9UJ78 669 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 ACTL7AQ9Y615 435 aa14.22□□□□□ -0.13
CLK3-204ENST00000483723 MKI67P46013 3256 aaKnown RBP14.22□□□□□ -0.13
CLK3-204ENST00000483723 TM9SF1O15321 606 aa14.21□□□□□ -0.13
CLK3-204ENST00000483723 XYLBO75191 536 aa14.21□□□□□ -0.13
CLK3-204ENST00000483723 ATXN1LP0C7T5 689 aaKnown RBP14.21□□□□□ -0.13
CLK3-204ENST00000483723 TCF3P15923 654 aa14.21□□□□□ -0.13
CLK3-204ENST00000483723 CA4P22748 312 aa14.21□□□□□ -0.13
CLK3-204ENST00000483723 MZF1P28698 734 aaPredicted RBP14.21□□□□□ -0.13
CLK3-204ENST00000483723 GBP2P32456 591 aaPredicted RBP14.21□□□□□ -0.13
CLK3-204ENST00000483723 RPA3P35244 121 aaPredicted RBP14.21□□□□□ -0.13
CLK3-204ENST00000483723 GP5P40197 560 aa14.21□□□□□ -0.13
CLK3-204ENST00000483723 MAGEA10P43363 369 aaPredicted RBP14.21□□□□□ -0.13
CLK3-204ENST00000483723 SERPINH1P50454 418 aaKnown RBP14.21□□□□□ -0.13
CLK3-204ENST00000483723 NEK3P51956 506 aa14.21□□□□□ -0.13
CLK3-204ENST00000483723 LRRC14Q15048 493 aa14.21□□□□□ -0.13
CLK3-204ENST00000483723 TEAD2Q15562 447 aa14.21□□□□□ -0.13
CLK3-204ENST00000483723 GRTP1Q5TC63 336 aa14.21□□□□□ -0.13
CLK3-204ENST00000483723 PRPF38BQ5VTL8 546 aaKnown RBP14.21□□□□□ -0.13
CLK3-204ENST00000483723 CARNMT1Q8N4J0 409 aa14.21□□□□□ -0.13
CLK3-204ENST00000483723 PPHLN1Q8NEY8 458 aaKnown RBP14.21□□□□□ -0.13
CLK3-204ENST00000483723 ZNF707Q96C28 371 aaPredicted RBP14.21□□□□□ -0.13
CLK3-204ENST00000483723 CHMP6Q96FZ7 201 aa14.21□□□□□ -0.13
CLK3-204ENST00000483723 YBX2Q9Y2T7 364 aaKnown RBP14.21□□□□□ -0.13
CLK3-204ENST00000483723 PSAT1Q9Y617 370 aa14.21□□□□□ -0.13
CLK3-204ENST00000483723 TTC24A2A3L6 582 aaPredicted RBP14.21□□□□□ -0.14
CLK3-204ENST00000483723 SCAMP3O14828 347 aaKnown RBP14.21□□□□□ -0.14
CLK3-204ENST00000483723 SIN3BO75182 1162 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 CSPG5O95196 566 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 PAPSS2O95340 614 aaPredicted RBP14.21□□□□□ -0.14
CLK3-204ENST00000483723 PYGBP11216 843 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 DRD4P21917 467 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 ARCN1P48444 511 aaKnown RBP14.21□□□□□ -0.14
CLK3-204ENST00000483723 POU6F1Q14863 301 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 PCSK7Q16549 785 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 SLC5A9Q2M3M2 681 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 ARHGAP15Q53QZ3 475 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 PDPK2PQ6A1A2 396 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 FIBINQ8TAL6 211 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 WFDC5Q8TCV5 224 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 MGARPQ8TDB4 240 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 SH3RF2Q8TEC5 729 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 LMLNQ96KR4 655 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 MAGEB18Q96M61 343 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 NSMCE3Q96MG7 304 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 TRIB3Q96RU7 358 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms