RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 INTS11Q5TA45 600 aaKnown RBP11.95□□□□□ -0.5
VTI1A-205ENST00000483122 PIWIL3Q7Z3Z3 882 aaKnown RBP11.95□□□□□ -0.5
VTI1A-205ENST00000483122 DHFR2Q86XF0 187 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 NIM1KQ8IY84 436 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 PACRGLQ8N7B6 248 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 SLC7A14Q8TBB6 771 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 URGCPQ8TCY9 931 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 CLEC4DQ8WXI8 215 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 CERS2Q96G23 380 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 SH3YL1Q96HL8 342 aaPredicted RBP11.95□□□□□ -0.5
VTI1A-205ENST00000483122 ACE2Q9BYF1 805 aaPredicted RBP11.95□□□□□ -0.5
VTI1A-205ENST00000483122 MRPL40Q9NQ50 206 aaKnown RBP11.95□□□□□ -0.5
VTI1A-205ENST00000483122 ARMC1Q9NVT9 282 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 KLHL3Q9UH77 587 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 TMX2Q9Y320 296 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 MFHAS1Q9Y4C4 1052 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 COL4A5P29400 1685 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 SRCAPQ6ZRS2 3230 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 A6NL46 340 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 C2CD4BA6NLJ0 364 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 SDHDO14521 159 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 MICAL2O94851 1124 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 CYP2F1P24903 491 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 GLRBP48167 497 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 NEK2P51955 445 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 RAD23AP54725 363 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 TPTEP56180 551 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 KRT76Q01546 638 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 DNASE1L3Q13609 305 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 ARL13BQ3SXY8 428 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 MTERF2Q49AM1 385 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 TBCELQ5QJ74 424 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 AGAP7PQ5VUJ5 663 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 LIPMQ5VYY2 423 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 SWSAP1Q6NVH7 229 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 PIGZQ86VD9 579 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 NETO2Q8NC67 525 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 OR2T34Q8NGX1 318 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 OR2T3Q8NH03 318 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 ZC3H15Q8WU90 426 aaKnown RBP11.95□□□□□ -0.5
VTI1A-205ENST00000483122 TWNKQ96RR1 684 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 ZNF347Q96SE7 839 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 SNRNP25Q9BV90 132 aaKnown RBP11.95□□□□□ -0.5
VTI1A-205ENST00000483122 CEP41Q9BYV8 373 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 ADAMTS10Q9H324 1103 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 SPAG4Q9NPE6 437 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 IFT80Q9P2H3 777 aaPredicted RBP11.95□□□□□ -0.5
VTI1A-205ENST00000483122 HMGXB4Q9UGU5 601 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 SARDHQ9UL12 918 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 PSME2Q9UL46 239 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 PCDHA10Q9Y5I2 948 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 ZNF646O15015 1829 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-205ENST00000483122 K7ERI5 159 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 RSL1D1O76021 490 aaKnown RBP11.94□□□□□ -0.5
VTI1A-205ENST00000483122 CPNE6O95741 557 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 HOXD11P31277 338 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-205ENST00000483122 SPRP35270 261 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-205ENST00000483122 LIMK2P53671 638 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 SPCS2Q15005 226 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 PGM5Q15124 567 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 ATP6AP1Q15904 470 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 ZNF699Q32M78 642 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 AGKQ53H12 422 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 SLFN12LQ6IEE8 588 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 C4orf22Q6V702 233 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 ZYG11AQ6WRX3 759 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 ZBTB33Q86T24 672 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 CCDC60Q8IWA6 550 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-205ENST00000483122 TMEM151AQ8N4L1 468 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 PDPRQ8NCN5 879 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 UBA3Q8TBC4 463 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 SYTL5Q8TDW5 730 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-205ENST00000483122 SEPT8Q92599 483 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 ZMAT2Q96NC0 199 aaKnown RBP11.94□□□□□ -0.5
VTI1A-205ENST00000483122 TUBA1CQ9BQE3 449 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 IL22Q9GZX6 179 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 TASP1Q9H6P5 420 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 DBNDD1Q9H9R9 158 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 NGRNQ9NPE2 291 aaKnown RBP11.94□□□□□ -0.5
VTI1A-205ENST00000483122 CCDC167Q9P0B6 97 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 TMEM181Q9P2C4 612 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 MORF4L1Q9UBU8 362 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 KLQ9UEF7 1012 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 VTI1BQ9UEU0 232 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 ADAM28Q9UKQ2 775 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 OAZ3Q9UMX2 235 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 AP4E1Q9UPM8 1137 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 FIS1Q9Y3D6 152 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 CLDN25C9JDP6 229 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 MED7O43513 233 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 MPOP05164 745 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 MLNP12872 115 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 HLCSP50747 726 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 SLC7A2P52569 658 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 CSE1LP55060 971 aaKnown RBP11.94□□□□□ -0.5
VTI1A-205ENST00000483122 IFITM2Q01629 132 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 ZBTB17Q13105 803 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 PPIL2Q13356 520 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 AQP6Q13520 282 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 ZNF846Q147U1 533 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms