RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 HECAQ9UBI9 543 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-239ENST00000483086 LHX3Q9UBR4 397 aa12.29□□□□□ -0.44
HDLBP-239ENST00000483086 CNOT8Q9UFF9 292 aaKnown RBP12.29□□□□□ -0.44
HDLBP-239ENST00000483086 NENFQ9UMX5 172 aa12.29□□□□□ -0.44
HDLBP-239ENST00000483086 AP4E1Q9UPM8 1137 aa12.29□□□□□ -0.44
HDLBP-239ENST00000483086 A0A087X0T9 212 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 J3KR12 359 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 TLR4O00206 839 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 SLC31A1O15431 190 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 PCDHGA12O60330 932 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 PRNPP04156 253 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 CAPNS1P04632 268 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 FAM228BP0C875 321 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 ADRB3P13945 408 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 RGRP47804 291 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 CCT8P50990 548 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 CLDN6P56747 220 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 UBASH3AP57075 661 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 CLDN2P57739 230 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 SLC20A2Q08357 652 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 SFSWAPQ12872 951 aaKnown RBP12.28□□□□□ -0.44
HDLBP-239ENST00000483086 SERINC3Q13530 473 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 CYTH1Q15438 398 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 TPRG1LQ5T0D9 272 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 LRSAM1Q6UWE0 723 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 GCNT7Q6ZNI0 430 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 ADAT2Q7Z6V5 191 aaKnown RBP12.28□□□□□ -0.44
HDLBP-239ENST00000483086 SLC22A18ASQ8N1D0 253 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 UMODL1-AS1Q8N2C9 162 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 RHBDD1Q8TEB9 315 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 SAP25Q8TEE9 199 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 CPLX3Q8WVH0 158 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 ISG20Q96AZ6 181 aaKnown RBP12.28□□□□□ -0.44
HDLBP-239ENST00000483086 ZNF653Q96CK0 615 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 ARHGEF26Q96DR7 871 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 EXOC2Q96KP1 924 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 HEPHQ9BQS7 1158 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 PREBQ9HCU5 417 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 MYO1AQ9UBC5 1043 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 FADS3Q9Y5Q0 445 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 ZFYVE26Q68DK2 2539 aa12.28□□□□□ -0.44
HDLBP-239ENST00000483086 ASXL3Q9C0F0 2248 aa12.27□□□□□ -0.44
HDLBP-239ENST00000483086 APC2O95996 2303 aa12.27□□□□□ -0.44
HDLBP-239ENST00000483086 A0A1W2PQJ5 194 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 FAM221BA6H8Z2 402 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 C16orf96A6NNT2 1141 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 FLRT2O43155 660 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 UGT2B4P06133 528 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 CCDC172P0C7W6 258 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 ITGB7P26010 798 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 EPHA8P29322 1005 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-239ENST00000483086 C21orf59P57076 290 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 AFMIDQ63HM1 303 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 UNQ6494/PRO21346Q6UXR6 183 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 PRPF39Q86UA1 669 aaKnown RBP12.27□□□□□ -0.45
HDLBP-239ENST00000483086 HORMAD1Q86X24 394 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 ZSWIM9Q86XI8 627 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 PLPP6Q8IY26 295 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 MFSD2AQ8NA29 543 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 OR13H1Q8NG92 308 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 OR2AP1Q8NGE2 309 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 FNIP1Q8TF40 1166 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 ADAMTS14Q8WXS8 1223 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 BMFQ96LC9 184 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 KLF6Q99612 283 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-239ENST00000483086 XPO4Q9C0E2 1151 aaKnown RBP12.27□□□□□ -0.45
HDLBP-239ENST00000483086 SLC39A8Q9C0K1 460 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 THAP2Q9H0W7 228 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 DHX35Q9H5Z1 703 aaKnown RBP12.27□□□□□ -0.45
HDLBP-239ENST00000483086 RETREG1Q9H6L5 497 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 ETNK2Q9NVF9 386 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 CAPN11Q9UMQ6 739 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 KNTC1P50748 2209 aa12.27□□□□□ -0.45
HDLBP-239ENST00000483086 SMG1Q96Q15 3661 aaKnown RBP12.26□□□□□ -0.45
HDLBP-239ENST00000483086 CXorf51AA0A1B0GTR3 108 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 POM121BA6NF01 834 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 GOLGA8CPA6NN73 597 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 MUSKO15146 869 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 BUB1O43683 1085 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 PIGNO95427 931 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 GSRP00390 522 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 GIMD1P0DJR0 217 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 ERCC2P18074 760 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 NEK3P51956 506 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 AIF1P55008 147 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 TPI1P60174 286 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 DPYSQ14117 519 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 ST3GAL2Q16842 350 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 SMTNL2Q2TAL5 461 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 MYLK3Q32MK0 819 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 ERMARDQ5T6L9 678 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 NYAP1Q6ZVC0 841 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 FUBP1Q96AE4 644 aaKnown RBP12.26□□□□□ -0.45
HDLBP-239ENST00000483086 CCDC114Q96M63 670 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 KLHL32Q96NJ5 620 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 EPAS1Q99814 870 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 GPR27Q9NS67 375 aa12.26□□□□□ -0.45
HDLBP-239ENST00000483086 CWC15Q9P013 229 aaKnown RBP12.26□□□□□ -0.45
HDLBP-239ENST00000483086 PNMA8BQ9ULN7 279 aaPredicted RBP12.26□□□□□ -0.45
HDLBP-239ENST00000483086 DMTF1Q9Y222 760 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms