RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 GLMNQ92990 594 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 C1orf74Q96LT6 269 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 CCNL2Q96S94 520 aaPredicted RBP13.06□□□□□ -0.32
TMEM54-206ENST00000482771 SRRTQ9BXP5 876 aaKnown RBP13.06□□□□□ -0.32
TMEM54-206ENST00000482771 TCEAL2Q9H3H9 227 aaPredicted RBP13.06□□□□□ -0.32
TMEM54-206ENST00000482771 SYNCQ9H7C4 482 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 TMPRSS4Q9NRS4 437 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 ARHGEF38Q9NXL2 777 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 HOOK1Q9UJC3 728 aaKnown RBP13.06□□□□□ -0.32
TMEM54-206ENST00000482771 MAN1B1Q9UKM7 699 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 NYNRINQ9P2P1 1898 aaKnown RBP13.06□□□□□ -0.32
TMEM54-206ENST00000482771 TLN1Q9Y490 2541 aaKnown RBP13.05□□□□□ -0.32
TMEM54-206ENST00000482771 NEMP1O14524 444 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 RIOK3O14730 519 aaKnown RBP13.05□□□□□ -0.32
TMEM54-206ENST00000482771 YY2O15391 372 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 TSPAN6O43657 245 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 AP1G1O43747 822 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 DAB1O75553 588 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 ZMPSTE24O75844 475 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 GNA14O95837 355 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 ANXA6P08133 673 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 PPP1R2P41236 205 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 SNX16P57768 344 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 APBA1Q02410 837 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 NFATC3Q12968 1075 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 PRRT3Q5FWE3 981 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 BRMS1LQ5PSV4 323 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 SLC26A9Q7LBE3 791 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 CLEC14AQ86T13 490 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 SLC35F3Q8IY50 421 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 RBFAQ8N0V3 343 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 PCDH20Q8N6Y1 951 aaKnown RBP13.05□□□□□ -0.32
TMEM54-206ENST00000482771 C1orf131Q8NDD1 294 aaKnown RBP13.05□□□□□ -0.32
TMEM54-206ENST00000482771 NPY6RQ99463 290 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 BOCQ9BWV1 1114 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 FAM117AQ9C073 453 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 SYNDIG1Q9H7V2 258 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.05□□□□□ -0.32
TMEM54-206ENST00000482771 HECAQ9UBI9 543 aaPredicted RBP13.05□□□□□ -0.32
TMEM54-206ENST00000482771 GULP1Q9UBP9 304 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 IL17BQ9UHF5 180 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 PADI4Q9UM07 663 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 PCDHGC3Q9UN70 934 aa13.05□□□□□ -0.32
TMEM54-206ENST00000482771 FCF1Q9Y324 198 aaKnown RBP13.05□□□□□ -0.32
TMEM54-206ENST00000482771 CCDC187A0A096LP49 1063 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 BICDL2A1A5D9 508 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 ILVBLA1L0T0 632 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 C16orf96A6NNT2 1141 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 LMO7DNF2Z398 122 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 GJB6O95452 261 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 F9P00740 461 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 SLC9A1P19634 815 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 BMP6P22004 513 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 GKP32189 559 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 KRT9P35527 623 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 SULT1E1P49888 294 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 SERPINH1P50454 418 aaKnown RBP13.04□□□□□ -0.32
TMEM54-206ENST00000482771 CSRP3P50461 194 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 CCNHP51946 323 aaPredicted RBP13.04□□□□□ -0.32
TMEM54-206ENST00000482771 THOP1P52888 689 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 PFN3P60673 137 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 DEUP1Q05D60 604 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 SPIDRQ14159 915 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 PTK2BQ14289 1009 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 FAXCQ5TGI0 409 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 OTUD1Q5VV17 481 aaPredicted RBP13.04□□□□□ -0.32
TMEM54-206ENST00000482771 USP53Q70EK8 1073 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 PARS2Q7L3T8 475 aaKnown RBP13.04□□□□□ -0.32
TMEM54-206ENST00000482771 CREBRFQ8IUR6 639 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 RYBPQ8N488 228 aaPredicted RBP13.04□□□□□ -0.32
TMEM54-206ENST00000482771 WDR48Q8TAF3 677 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 ASB12Q8WXK4 309 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 NAT6Q93015 286 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 CENPTQ96BT3 561 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 TIGD1Q96MW7 591 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 CCDC3Q9BQI4 270 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 SLC13A1Q9BZW2 595 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 CEP44Q9C0F1 390 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 ZDHHC6Q9H6R6 413 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 ATP13A1Q9HD20 1204 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 RRN3Q9NYV6 651 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 APOBEC3BQ9UH17 382 aaKnown RBP13.04□□□□□ -0.32
TMEM54-206ENST00000482771 GGT7Q9UJ14 662 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 PNMA8BQ9ULN7 279 aaPredicted RBP13.04□□□□□ -0.32
TMEM54-206ENST00000482771 CTNND2Q9UQB3 1225 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 HEMK1Q9Y5R4 338 aaPredicted RBP13.04□□□□□ -0.32
TMEM54-206ENST00000482771 ACTL7AQ9Y615 435 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 PTPN13Q12923 2485 aa13.04□□□□□ -0.32
TMEM54-206ENST00000482771 IGLV3-10A0A075B6K4 115 aa13.03□□□□□ -0.32
TMEM54-206ENST00000482771 ITGA2BP08514 1039 aa13.03□□□□□ -0.32
TMEM54-206ENST00000482771 SLC5A2P31639 672 aa13.03□□□□□ -0.32
TMEM54-206ENST00000482771 MLLT3P42568 568 aaPredicted RBP13.03□□□□□ -0.32
TMEM54-206ENST00000482771 ABL2P42684 1182 aa13.03□□□□□ -0.32
TMEM54-206ENST00000482771 MARSP56192 900 aaKnown RBP13.03□□□□□ -0.32
TMEM54-206ENST00000482771 ARF5P84085 180 aa13.03□□□□□ -0.32
TMEM54-206ENST00000482771 PTK2Q05397 1052 aa13.03□□□□□ -0.32
TMEM54-206ENST00000482771 TGIF1Q15583 401 aa13.03□□□□□ -0.32
TMEM54-206ENST00000482771 LINC00303Q3SY05 128 aa13.03□□□□□ -0.32
TMEM54-206ENST00000482771 PTPN20Q4JDL3 420 aa13.03□□□□□ -0.32
TMEM54-206ENST00000482771 C6orf132Q5T0Z8 1188 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms