RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 FGFR4P22455 802 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 ABCD1P33897 745 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 ALDH7A1P49419 539 aaKnown RBP6.9□□□□□ -1.3
CLK1-212ENST00000482590 SLC5A3P53794 718 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 CCT2P78371 535 aaKnown RBP6.9□□□□□ -1.3
CLK1-212ENST00000482590 FAM189BP81408 668 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 CDC42EP1Q00587 391 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 CREMQ03060 361 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 RNASELQ05823 741 aaKnown RBP6.9□□□□□ -1.3
CLK1-212ENST00000482590 RIN1Q13671 783 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 TRIM29Q14134 588 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 ASIC2Q16515 512 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 XKR3Q5GH77 459 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 CLLU1OSQ5K130 101 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 ZNF362Q5T0B9 420 aaPredicted RBP6.9□□□□□ -1.3
CLK1-212ENST00000482590 SYCE2Q6PIF2 218 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 ZNF410Q86VK4 478 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 SLC39A11Q8N1S5 342 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 PRSS33Q8NF86 280 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 STT3BQ8TCJ2 826 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 TBCKQ8TEA7 893 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 MUL1Q969V5 352 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 JAKMIP2Q96AA8 810 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 ZG16BQ96DA0 208 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 C18orf8Q96DM3 657 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 JPH2Q9BR39 696 aaPredicted RBP6.9□□□□□ -1.3
CLK1-212ENST00000482590 PI4K2AQ9BTU6 479 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 GRPEL1Q9HAV7 217 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 XAB2Q9HCS7 855 aaKnown RBP6.9□□□□□ -1.3
CLK1-212ENST00000482590 PDCD11Q14690 1871 aaKnown RBP6.9□□□□□ -1.31
CLK1-212ENST00000482590 MYO15AQ9UKN7 3530 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 A0A087WZ62 844 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 NT5C1B-RDH14C9J2C7 533 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 F8W8V4 182 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 SCDO00767 359 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 DVL2O14641 736 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 HNRNPDLO14979 420 aaKnown RBP6.89□□□□□ -1.31
CLK1-212ENST00000482590 PHGDHO43175 533 aaKnown RBP6.89□□□□□ -1.31
CLK1-212ENST00000482590 PTP4A3O75365 173 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 B3GALNT1O75752 331 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 TDP2O95551 362 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 MT-ND3P03897 115 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 MTHFD2P13995 350 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 PORP16435 677 aaPredicted RBP6.89□□□□□ -1.31
CLK1-212ENST00000482590 CHMP24386 653 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 MTHFRP42898 656 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 TPD52P55327 224 aaPredicted RBP6.89□□□□□ -1.31
CLK1-212ENST00000482590 RNASE9P60153 205 aaKnown RBP6.89□□□□□ -1.31
CLK1-212ENST00000482590 ARF3P61204 181 aaPredicted RBP6.89□□□□□ -1.31
CLK1-212ENST00000482590 RAB1AP62820 205 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 MRPS35P82673 323 aaKnown RBP6.89□□□□□ -1.31
CLK1-212ENST00000482590 ARF1P84077 181 aaKnown RBP6.89□□□□□ -1.31
CLK1-212ENST00000482590 ITIH3Q06033 890 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 KCNC3Q14003 757 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 GIT2Q14161 759 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 NONOQ15233 471 aaKnown RBP eCLIP6.89□□□□□ -1.31
CLK1-212ENST00000482590 RASA2Q15283 850 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 Q4G0T1 1027 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 KLHDC7AQ5VTJ3 777 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 MOXD1Q6UVY6 613 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 TMEM184AQ6ZMB5 413 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 LRRC55Q6ZSA7 311 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 B4GALNT4Q76KP1 1039 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 RHPN2Q8IUC4 686 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 ULK2Q8IYT8 1036 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 BLIDQ8IZY5 108 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 FBXL16Q8N461 479 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 PPM1NQ8N819 430 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 TDRD5Q8NAT2 981 aaKnown RBP6.89□□□□□ -1.31
CLK1-212ENST00000482590 AVL9Q8NBF6 648 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 TOR1AIP2Q8NFQ8 470 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 URGCPQ8TCY9 931 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 CREB3L4Q8TEY5 395 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 CNDP2Q96KP4 475 aaKnown RBP6.89□□□□□ -1.31
CLK1-212ENST00000482590 NLRP4Q96MN2 994 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 GBP4Q96PP9 640 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 HEPHQ9BQS7 1158 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 SH2D3AQ9BRG2 576 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 FDXACB1Q9BRP7 624 aaPredicted RBP6.89□□□□□ -1.31
CLK1-212ENST00000482590 ZBP1Q9H171 429 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 ZMAT3Q9HA38 289 aaKnown RBP6.89□□□□□ -1.31
CLK1-212ENST00000482590 KRT84Q9NSB2 600 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 TMEM160Q9NX00 188 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 SORCS3Q9UPU3 1222 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 VWA8A3KMH1 1905 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 FANCMQ8IYD8 2048 aa6.89□□□□□ -1.31
CLK1-212ENST00000482590 SPTBN4Q9H254 2564 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 DOCK6Q96HP0 2047 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 PATJQ8NI35 1801 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 TMEM150BA6NC51 233 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 ISM1B1AKI9 464 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 C2CD4DB7Z1M9 353 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 HTRA2O43464 458 aaPredicted RBP6.88□□□□□ -1.31
CLK1-212ENST00000482590 CSDE1O75534 798 aaKnown RBP6.88□□□□□ -1.31
CLK1-212ENST00000482590 PSMD10O75832 226 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 KRT37O76014 449 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 TGDSO95455 350 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 P4HA1P13674 534 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 CD40P25942 277 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 ATP5DP30049 168 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms