RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 OGDHLQ9ULD0 1010 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 PHF24Q9UPV7 400 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 INPP5FQ9Y2H2 1132 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 RAP2CQ9Y3L5 183 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 RAD54BQ9Y620 910 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 MRPL42Q9Y6G3 142 aaKnown RBP15.08■□□□□ 0.01
ATG4B-220ENST00000482507 CAPN8A6NHC0 703 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 HHLA1C9JL84 531 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 NCAM2O15394 837 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 PIM1P11309 404 aaPredicted RBP15.08■□□□□ 0
ATG4B-220ENST00000482507 XRCC1P18887 633 aaPredicted RBP15.08■□□□□ 0
ATG4B-220ENST00000482507 TFEBP19484 476 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 LRPAP1P30533 357 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 RPL14P50914 215 aaKnown RBP15.08■□□□□ 0
ATG4B-220ENST00000482507 CRYBB1P53674 252 aaPredicted RBP15.08■□□□□ 0
ATG4B-220ENST00000482507 ANO4Q32M45 955 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 RAB41Q5JT25 222 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 OGFRL1Q5TC84 451 aaPredicted RBP15.08■□□□□ 0
ATG4B-220ENST00000482507 LIPMQ5VYY2 423 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 CEP97Q8IW35 865 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 DENND6AQ8IWF6 608 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 DSELQ8IZU8 1212 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 FSTL5Q8N475 847 aaPredicted RBP15.08■□□□□ 0
ATG4B-220ENST00000482507 TKTL2Q9H0I9 626 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 AGO3Q9H9G7 860 aaKnown RBP15.08■□□□□ 0
ATG4B-220ENST00000482507 TRHDEQ9UKU6 1024 aa15.08■□□□□ 0
ATG4B-220ENST00000482507 TMEM233B4DJY2 109 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 MT-CYBP00156 380 aaPredicted RBP15.07■□□□□ 0
ATG4B-220ENST00000482507 MNX1P50219 401 aaPredicted RBP15.07■□□□□ 0
ATG4B-220ENST00000482507 AIF1P55008 147 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 MPP1Q00013 466 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 CDC42EP1Q00587 391 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 MED21Q13503 144 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 USP10Q14694 798 aaKnown RBP15.07■□□□□ 0
ATG4B-220ENST00000482507 PCBP1Q15365 356 aaKnown RBP eCLIP15.07■□□□□ 02e-7■■□□□ 14.5
ATG4B-220ENST00000482507 CNPY1Q3B7I2 92 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 LIN52Q52LA3 116 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 TSTD2Q5T7W7 516 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 SEL1L3Q68CR1 1132 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 TMC7Q7Z402 723 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 C3orf58Q8NDZ4 430 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 STYXQ8WUJ0 223 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 RCN3Q96D15 328 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 PGAP3Q96FM1 320 aaPredicted RBP15.07■□□□□ 0
ATG4B-220ENST00000482507 SENP8Q96LD8 212 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 CATSPER2Q96P56 530 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 SH3GL3Q99963 347 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 KIFC1Q9BW19 673 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 FTHL17Q9BXU8 183 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 STK39Q9UEW8 545 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 RUVBL2Q9Y230 463 aaKnown RBP15.07■□□□□ 0
ATG4B-220ENST00000482507 MAGEB16A2A368 324 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 RGSL1A5PLK6 1076 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 STX16-NPEPL1H3BU86 382 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 ARVCFO00192 962 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 DLX3O60479 287 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 PQBP1O60828 265 aaKnown RBP15.07■□□□□ 0
ATG4B-220ENST00000482507 THRAP10827 490 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 ARNTP27540 789 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 PKNOX1P55347 436 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 MS4A2Q01362 244 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 SATB1Q01826 763 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 CDH17Q12864 832 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 CTBP1Q13363 440 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 GRM2Q14416 872 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 ZNF423Q2M1K9 1284 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 GRAMD1BQ3KR37 738 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 MFN1Q8IWA4 741 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 RNF148Q8N7C7 305 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 ZFAND2BQ8WV99 257 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 GPR78Q96P69 363 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 GCNAQ96QF7 691 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 CDRT15Q96T59 188 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 SPATA16Q9BXB7 569 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 RHOJQ9H4E5 214 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 PCDHGB4Q9UN71 923 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 PCDHGB5Q9Y5G0 923 aa15.07■□□□□ 0
ATG4B-220ENST00000482507 M0QZ92 97 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 H2AFYO75367 372 aaKnown RBP15.06■□□□□ 0
ATG4B-220ENST00000482507 ALDH1A3P47895 512 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 CXCR3P49682 368 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 CEACAM7Q14002 265 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 MMEL1Q495T6 779 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 PIGGQ5H8A4 983 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 INTS6LQ5JSJ4 861 aaKnown RBP15.06■□□□□ 0
ATG4B-220ENST00000482507 ITPRIPL1Q6GPH6 555 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 CPSF7Q8N684 471 aaKnown RBP15.06■□□□□ 0
ATG4B-220ENST00000482507 SCYL1Q96KG9 808 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 WDCPQ9H6R7 721 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 CNGB3Q9NQW8 809 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 SLC2A6Q9UGQ3 507 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 TLK1Q9UKI8 766 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 ST3GAL5Q9UNP4 418 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 NEU3Q9UQ49 428 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 ARSAP15289 507 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 GSTT1P30711 240 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 XIAPP98170 497 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 FOLH1Q04609 750 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 PDK3Q15120 406 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 TLR1Q15399 786 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms