RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 MSRB2Q9Y3D2 182 aa20.23■□□□□ 0.83
MSH5-215ENST00000482280 TMEM191CA6NGB0 347 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 WNT9AO14904 365 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 ZNF821O75541 412 aaPredicted RBP20.22■□□□□ 0.83
MSH5-215ENST00000482280 TMCC1O94876 653 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 PROS1P07225 676 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 XPAP23025 273 aaPredicted RBP20.22■□□□□ 0.83
MSH5-215ENST00000482280 OGDHQ02218 1023 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 NFKBIBQ15653 356 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 MYLK3Q32MK0 819 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 INO80DQ53TQ3 878 aaPredicted RBP20.22■□□□□ 0.83
MSH5-215ENST00000482280 ZNF805Q5CZA5 627 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 ARTNQ5T4W7 220 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 CFAP58Q5T655 872 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 RAB44Q7Z6P3 723 aaPredicted RBP20.22■□□□□ 0.83
MSH5-215ENST00000482280 GATAD2AQ86YP4 633 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 FAM174AQ8TBP5 190 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 FNIP1Q8TF40 1166 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 SYN2Q92777 582 aaPredicted RBP20.22■□□□□ 0.83
MSH5-215ENST00000482280 HMCESQ96FZ2 354 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 TTYH3Q9C0H2 523 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 UBA2Q9UBT2 640 aaPredicted RBP20.22■□□□□ 0.83
MSH5-215ENST00000482280 KLK13Q9UKR3 277 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 WASF3Q9UPY6 502 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 NEU3Q9UQ49 428 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 BTBD3Q9Y2F9 522 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 LUC7L2Q9Y383 392 aaKnown RBP20.22■□□□□ 0.83
MSH5-215ENST00000482280 ACTL7AQ9Y615 435 aa20.22■□□□□ 0.83
MSH5-215ENST00000482280 ARHGAP42A6NI28 874 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 WASH4PA8MWX3 477 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 C1QTNF9BB2RNN3 333 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 DDX3XO00571 662 aaKnown RBP eCLIP20.21■□□□□ 0.837e-9■■□□□ 12.6
MSH5-215ENST00000482280 TSPAN6O43657 245 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 SERPING1P05155 500 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 UGT2B4P06133 528 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 C1QTNF9P0C862 333 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 THEGLP0DJG4 465 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 ZNF135P52742 658 aaPredicted RBP20.21■□□□□ 0.83
MSH5-215ENST00000482280 NDST2P52849 883 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 ZBED6P86452 979 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 ZNF284Q2VY69 593 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 PPP6R3Q5H9R7 873 aaPredicted RBP20.21■□□□□ 0.83
MSH5-215ENST00000482280 GDPD4Q6W3E5 623 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 UMODL1-AS1Q8N2C9 162 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 PAF1Q8N7H5 531 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 CALN1Q9BXU9 219 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 ZWILCHQ9H900 591 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 GPATCH2LQ9NWQ4 482 aa20.21■□□□□ 0.83
MSH5-215ENST00000482280 PLXNA2O75051 1894 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 C16orf96A6NNT2 1141 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 C10orf142B7Z368 130 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 AP1G1O43747 822 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 LDOC1O95751 146 aaPredicted RBP20.2■□□□□ 0.82
MSH5-215ENST00000482280 ATXN1LP0C7T5 689 aaKnown RBP20.2■□□□□ 0.82
MSH5-215ENST00000482280 EPHA8P29322 1005 aaPredicted RBP20.2■□□□□ 0.82
MSH5-215ENST00000482280 SERINC3Q13530 473 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 ACAP1Q15027 740 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 ZSCAN23Q3MJ62 389 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 ATXN7L2Q5T6C5 722 aaPredicted RBP20.2■□□□□ 0.82
MSH5-215ENST00000482280 SEL1L3Q68CR1 1132 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 PARS2Q7L3T8 475 aaKnown RBP20.2■□□□□ 0.82
MSH5-215ENST00000482280 TTC7BQ86TV6 843 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 PSTKQ8IV42 348 aaKnown RBP20.2■□□□□ 0.82
MSH5-215ENST00000482280 BAHD1Q8TBE0 780 aaPredicted RBP20.2■□□□□ 0.82
MSH5-215ENST00000482280 KLHL32Q96NJ5 620 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 SLC17A9Q9BYT1 436 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 IFNKQ9P0W0 207 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.2■□□□□ 0.825e-12■□□□□ 9.8
MSH5-215ENST00000482280 FADS3Q9Y5Q0 445 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 DOCK4Q8N1I0 1966 aa20.2■□□□□ 0.82
MSH5-215ENST00000482280 A6NNZ2 444 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 CD160O95971 181 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 MIPP30301 263 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 GKP32189 559 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 RXRGP48443 463 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 GRM3Q14832 879 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 E4F1Q66K89 784 aaPredicted RBP20.19■□□□□ 0.82
MSH5-215ENST00000482280 PTAR1Q7Z6K3 402 aaPredicted RBP20.19■□□□□ 0.82
MSH5-215ENST00000482280 GALNT15Q8N3T1 639 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 EID2Q8N6I1 236 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 SAP25Q8TEE9 199 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 CNDP2Q96KP4 475 aaKnown RBP20.19■□□□□ 0.82
MSH5-215ENST00000482280 SNRNP25Q9BV90 132 aaKnown RBP20.19■□□□□ 0.82
MSH5-215ENST00000482280 C1QTNF7Q9BXJ2 289 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 ISCUQ9H1K1 167 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 FZD3Q9NPG1 666 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 IPO11Q9UI26 975 aaKnown RBP20.19■□□□□ 0.82
MSH5-215ENST00000482280 CA5BQ9Y2D0 317 aa20.19■□□□□ 0.82
MSH5-215ENST00000482280 FPGTO14772 594 aa20.18■□□□□ 0.82
MSH5-215ENST00000482280 ARL4AP40617 200 aa20.18■□□□□ 0.82
MSH5-215ENST00000482280 PIGHQ14442 188 aaPredicted RBP20.18■□□□□ 0.82
MSH5-215ENST00000482280 RFX8Q6ZV50 586 aa20.18■□□□□ 0.82
MSH5-215ENST00000482280 SLCO6A1Q86UG4 719 aa20.18■□□□□ 0.82
MSH5-215ENST00000482280 DNAAF5Q86Y56 855 aa20.18■□□□□ 0.82
MSH5-215ENST00000482280 DCP2Q8IU60 420 aaKnown RBP20.18■□□□□ 0.82
MSH5-215ENST00000482280 TMEM145Q8NBT3 493 aa20.18■□□□□ 0.82
MSH5-215ENST00000482280 CELF6Q96J87 481 aaKnown RBP20.18■□□□□ 0.82
MSH5-215ENST00000482280 NOL6Q9H6R4 1146 aaKnown RBP20.18■□□□□ 0.82
MSH5-215ENST00000482280 SP110Q9HB58 689 aa20.18■□□□□ 0.82
MSH5-215ENST00000482280 CAPN11Q9UMQ6 739 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms