RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 NAT10Q9H0A0 1025 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 FZD3Q9NPG1 666 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 FADS3Q9Y5Q0 445 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 LAMA5O15230 3695 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 CABIN1Q9Y6J0 2220 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 NEMP2A6NFY4 417 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 ZSCAN5CA6NGD5 496 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 A6NNZ2 444 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 NEMP1O14524 444 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 TSPAN6O43657 245 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 GSRP00390 522 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 TNFAIP3P21580 790 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 ZNF143P52747 638 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 AIF1P55008 147 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 CLDN2P57739 230 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 E2F1Q01094 437 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 ZNF211Q13398 564 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 MYLK3Q32MK0 819 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 TMEM259Q4ZIN3 620 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 ZNF805Q5CZA5 627 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 EFHC2Q5JST6 749 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 SEL1L3Q68CR1 1132 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 ACAD10Q6JQN1 1059 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 PPP1R2P3Q6NXS1 205 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 DNAJC24Q6P3W2 148 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 DCUN1D2Q6PH85 259 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 Q6ZSR6 202 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 ABI3BPQ7Z7G0 1075 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 DNAAF5Q86Y56 855 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 PYROXD2Q8N2H3 581 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 SLC25A45Q8N413 288 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 OR13H1Q8NG92 308 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 CASKIN2Q8WXE0 1202 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 ARHGEF26Q96DR7 871 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 IFT43Q96FT9 208 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 SYT11Q9BT88 431 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 OSBPL1AQ9BXW6 950 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 CATSPERBQ9H7T0 1116 aa13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 IPO11Q9UI26 975 aaKnown RBP13.67□□□□□ -0.22
CTDSP1-208ENST00000482272 CELSR3Q9NYQ7 3312 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 DMXL2Q8TDJ6 3036 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 KNL1Q8NG31 2342 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 C16orf96A6NNT2 1141 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 KRIT1O00522 736 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 FPGTO14772 594 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 CCP110O43303 1012 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 BUB1O43683 1085 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 SIGLEC6O43699 453 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 CREB3O43889 395 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 ALPPL2P10696 532 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 DGKAP23743 735 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 ACP1P24666 158 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 EPHB2P29323 1055 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 GKP32189 559 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 CLDN6P56747 220 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 YBEYP58557 167 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 DAB2P98082 770 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 TYRO3Q06418 890 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 INO80DQ53TQ3 878 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 CCDC183Q5T5S1 534 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 E4F1Q66K89 784 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 C19orf48Q6RUI8 117 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 GCNT7Q6ZNI0 430 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 PARS2Q7L3T8 475 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 BAP1Q92560 729 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 BMFQ96LC9 184 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 MCEEQ96PE7 176 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 LENG8Q96PV6 779 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 EPAS1Q99814 870 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 NOL6Q9H6R4 1146 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 DONSONQ9NYP3 566 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 TAS2R14Q9NYV8 317 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 RAXQ9Y2V3 346 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 GPSM3Q9Y4H4 160 aa13.66□□□□□ -0.22
CTDSP1-208ENST00000482272 TRIM38O00635 465 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 UGT2B4P06133 528 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 RABIFP47224 123 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 HNRNPKP61978 463 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 RPL7AP62424 266 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 OGDHQ02218 1023 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 TARDBPQ13148 414 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 PROX2Q3B8N5 592 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 ANO6Q4KMQ2 910 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 PPP1R15BQ5SWA1 713 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 HES3Q5TGS1 186 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 GDPD4Q6W3E5 623 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 KDM7AQ6ZMT4 941 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 LEKR1Q6ZMV7 388 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 PTAR1Q7Z6K3 402 aaPredicted RBP13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 TTC7BQ86TV6 843 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 MCOLN2Q8IZK6 566 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 CACTIN-AS1Q8N1I8 211 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 RTL3Q8N8U3 475 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 NETO2Q8NC67 525 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 OR6K2Q8NGY2 324 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 OR4C6Q8NH72 309 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 HNRNPLLQ8WVV9 542 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 ASB12Q8WXK4 309 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 NXPE2Q96DL1 559 aa13.65□□□□□ -0.22
CTDSP1-208ENST00000482272 VCPIP1Q96JH7 1222 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms