RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 GLDCP23378 1020 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 OCRLQ01968 901 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 CHI3L2Q15782 390 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 CNKSR3Q6P9H4 555 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 TIFABQ6ZNK6 161 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 LGI2Q8N0V4 545 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 PGBD5Q8N414 524 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.65□□□□□ -0.06
CHD3-211ENST00000481999 PRR11Q96HE9 360 aaPredicted RBP14.65□□□□□ -0.06
CHD3-211ENST00000481999 MRGPRX2Q96LB1 330 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 WWP1Q9H0M0 922 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 C20orf96Q9NUD7 363 aaPredicted RBP14.65□□□□□ -0.06
CHD3-211ENST00000481999 ZNF840PA6NDX5 716 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 H0Y3Z8 333 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 NRG2O14511 850 aaPredicted RBP14.64□□□□□ -0.07
CHD3-211ENST00000481999 MUSKO15146 869 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 SAT1P21673 171 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 CD86P42081 329 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 ZNF135P52742 658 aaPredicted RBP14.64□□□□□ -0.07
CHD3-211ENST00000481999 PDE1CQ14123 709 aaPredicted RBP14.64□□□□□ -0.07
CHD3-211ENST00000481999 BTG3Q14201 252 aaPredicted RBP14.64□□□□□ -0.07
CHD3-211ENST00000481999 STRA8Q7Z7C7 330 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 RNF135Q8IUD6 432 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 CRLF3Q8IUI8 442 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 ARHGAP18Q8N392 663 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 VAT1Q99536 393 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 C20orf27Q9GZN8 174 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 NMUR2Q9GZQ4 415 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 LRRC40Q9H9A6 602 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 ACSS2Q9NR19 701 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 IARS2Q9NSE4 1012 aaKnown RBP14.64□□□□□ -0.07
CHD3-211ENST00000481999 STOML1Q9UBI4 398 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 LIN7AO14910 233 aaPredicted RBP14.64□□□□□ -0.07
CHD3-211ENST00000481999 NEBLO76041 1014 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 ATP5BP06576 529 aaKnown RBP14.64□□□□□ -0.07
CHD3-211ENST00000481999 BPGMP07738 259 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 CDH17Q12864 832 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 DBN1Q16643 649 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 CMPK2Q5EBM0 449 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 ESRP1Q6NXG1 681 aaKnown RBP14.64□□□□□ -0.07
CHD3-211ENST00000481999 MARK2Q7KZI7 788 aaKnown RBP14.64□□□□□ -0.07
CHD3-211ENST00000481999 TTC7BQ86TV6 843 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 ARID3BQ8IVW6 561 aaPredicted RBP14.64□□□□□ -0.07
CHD3-211ENST00000481999 DENND6AQ8IWF6 608 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 TNS4Q8IZW8 715 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 ARHGAP24Q8N264 748 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 ATP6V0D2Q8N8Y2 350 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 ZNF461Q8TAF7 563 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 MOCOSQ96EN8 888 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 TMEM169Q96HH4 297 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 ABHD8Q96I13 439 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 TOX2Q96NM4 488 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 TBL1YQ9BQ87 522 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 FSD1LQ9BXM9 530 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 UNKQ9C0B0 810 aaKnown RBP14.64□□□□□ -0.07
CHD3-211ENST00000481999 TMEM248Q9NWD8 314 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 TAS2R1Q9NYW7 299 aa14.64□□□□□ -0.07
CHD3-211ENST00000481999 KIF1CO43896 1103 aaKnown RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 CACNG3O60359 315 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 TSPAN3O60637 253 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 SLC2A3P11169 496 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 RHOQP17081 205 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 PTDSS1P48651 473 aaKnown RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 WDR5P61964 334 aaKnown RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 RPL10AP62906 217 aaKnown RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 COG7P83436 770 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 ZXDBP98169 803 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 KHDC1Q4VXA5 237 aaKnown RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 TEDDM1Q5T9Z0 273 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 RINLQ6ZS11 566 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 KCNMB4Q86W47 210 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 KIRREL3Q8IZU9 778 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 UMODL1-AS1Q8N2C9 162 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 OR7D4Q8NG98 312 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 EXOC2Q96KP1 924 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 PRICKLE1Q96MT3 831 aaPredicted RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 IGLV3-10A0A075B6K4 115 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 SNNO75324 88 aaPredicted RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 SOD2P04179 222 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 ARNTP27540 789 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 IRF9Q00978 393 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 PDE1BQ01064 536 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 CTBP1Q13363 440 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 SEPT6Q14141 434 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 POLD3Q15054 466 aaPredicted RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 STXBP5Q5T5C0 1151 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 NAPEPLDQ6IQ20 393 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 FSTL4Q6MZW2 842 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 KYAT3Q6YP21 454 aaKnown RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 ALYREFQ86V81 257 aaKnown RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 PLD6Q8N2A8 252 aaKnown RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 LZTR1Q8N653 840 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 ACMSDQ8TDX5 336 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 CDKL2Q92772 493 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 ZNF689Q96CS4 500 aaPredicted RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 FCRL5Q96RD9 977 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 UBE2OQ9C0C9 1292 aaKnown RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 SP110Q9HB58 689 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 RC3H2Q9HBD1 1191 aaKnown RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 EMCNQ9ULC0 261 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms