RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TIE1P35590 1138 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 ABL2P42684 1182 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 KIR2DL1P43626 348 aaPredicted RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 SERPINH1P50454 418 aaKnown RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 RENBPP51606 427 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 CKAP4Q07065 602 aaKnown RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 SIGLEC14Q08ET2 396 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 SLC10A7Q0GE19 358 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 EIF2B5Q13144 721 aaKnown RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 CCINQ13939 588 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 HNRNPDQ14103 355 aaKnown RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 UBXN2BQ14CS0 331 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 WHAMMP3Q1A5X7 153 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 KBTBD12Q3ZCT8 623 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 FBXO43Q4G163 708 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 INO80DQ53TQ3 878 aaPredicted RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 C2orf27AQ580R0 203 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 MARC1Q5VT66 337 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 CDKL3Q8IVW4 592 aaPredicted RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 HTR3CQ8WXA8 447 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 NKD2Q969F2 451 aaPredicted RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 ZNF599Q96NL3 588 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 QKIQ96PU8 341 aaKnown RBP eCLIP11.78□□□□□ -0.52
HPS4-212ENST00000481910 LTB4R2Q9NPC1 389 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 ZDHHC4Q9NPG8 344 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 ITGB1BP2Q9UKP3 347 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 SLC8A2Q9UPR5 921 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 HS3ST2Q9Y278 367 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 NCOR1O75376 2440 aa11.77□□□□□ -0.52
HPS4-212ENST00000481910 A0A087WUV0 522 aaPredicted RBP11.77□□□□□ -0.53
HPS4-212ENST00000481910 BCLAF3A2AJT9 711 aaKnown RBP11.77□□□□□ -0.53
HPS4-212ENST00000481910 FAM170BA6NMN3 283 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 KCNN4O15554 427 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 MTSS1O43312 755 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 ATP8B1O43520 1251 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 SMAD6O43541 496 aaKnown RBP11.77□□□□□ -0.53
HPS4-212ENST00000481910 PEX11BO96011 259 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 VAV1P15498 845 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 KCNJ1P48048 391 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 CLCN6P51797 869 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 ZNF234Q14588 700 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 RFTN1Q14699 578 aaPredicted RBP11.77□□□□□ -0.53
HPS4-212ENST00000481910 LBRQ14739 615 aaKnown RBP11.77□□□□□ -0.53
HPS4-212ENST00000481910 CYP1B1Q16678 543 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 FNDC3BQ53EP0 1204 aaKnown RBP11.77□□□□□ -0.53
HPS4-212ENST00000481910 EGFLAMQ63HQ2 1017 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 DRICH1Q6PGQ1 229 aaPredicted RBP11.77□□□□□ -0.53
HPS4-212ENST00000481910 C11orf96Q7Z7L8 435 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 CHPFQ8IZ52 775 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 SH2D3CQ8N5H7 860 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 USP33Q8TEY7 942 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 MRGPRX3Q96LB0 322 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 CCDC114Q96M63 670 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 TBC1D17Q9HA65 648 aa11.77□□□□□ -0.53
HPS4-212ENST00000481910 RBM12Q9NTZ6 932 aaKnown RBP11.77□□□□□ -0.53
HPS4-212ENST00000481910 THAP10Q9P2Z0 257 aaPredicted RBP11.77□□□□□ -0.53
HPS4-212ENST00000481910 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.77□□□□□ -0.53
HPS4-212ENST00000481910 DRG1Q9Y295 367 aaKnown RBP11.77□□□□□ -0.53
HPS4-212ENST00000481910 FCF1Q9Y324 198 aaKnown RBP11.77□□□□□ -0.53
HPS4-212ENST00000481910 MTF2Q9Y483 593 aaPredicted RBP11.77□□□□□ -0.53
HPS4-212ENST00000481910 CCDC188H7C350 402 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 SGK1O00141 431 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 PDLIM1O00151 329 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 PHF2O75151 1096 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 TMCC1O94876 653 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 JCHAINP01591 159 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 ITGAVP06756 1048 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 CHRNB1P11230 501 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 SRCP12931 536 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 ALADP13716 330 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 HNRNPLP14866 589 aaKnown RBP eCLIP11.76□□□□□ -0.53
HPS4-212ENST00000481910 TARSP26639 723 aaKnown RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 MMP13P45452 471 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 OASLQ15646 514 aaKnown RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 DLG2Q15700 870 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 CCDC92Q53HC0 331 aaPredicted RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 DGKKQ5KSL6 1271 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 FAM182AQ5T1J6 154 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 CCDC137Q6PK04 289 aaKnown RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 SERPINA13PQ6UXR4 307 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 GSTA5Q7RTV2 222 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 METTL3Q86U44 580 aaKnown RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 CCDC105Q8IYK2 499 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 BBS5Q8N3I7 341 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 C12orf50Q8NA57 414 aaPredicted RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 SPATA4Q8NEY3 305 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 CASKIN2Q8WXE0 1202 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 FATE1Q969F0 183 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 MRRFQ96E11 262 aaKnown RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 MYO19Q96H55 970 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 SCYL1Q96KG9 808 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 ACOX2Q99424 681 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 CINPQ9BW66 212 aaPredicted RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 CEP41Q9BYV8 373 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 FOXQ1Q9C009 403 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 DDX47Q9H0S4 455 aaKnown RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 MFSD1Q9H3U5 465 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 LMAN1LQ9HAT1 526 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 USP29Q9HBJ7 922 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 RBM22Q9NW64 420 aaKnown RBP eCLIP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms