RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 TSPYL1Q9H0U9 437 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 ELOVL2Q9NXB9 296 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 SLCO3A1Q9UIG8 710 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 COL4A3Q01955 1670 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 PRRT4C9JH25 899 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 TIMM44O43615 452 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 PMPCBO75439 489 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 GJB3O75712 270 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 SUN1O94901 812 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 ATP5BP06576 529 aaKnown RBP17.82■□□□□ 0.44
UPF3A-206ENST00000480362 ASGR2P07307 311 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 CR2P20023 1033 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 CES1P23141 567 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 GRIA1P42261 906 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 ARL4CP56559 192 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 SKOR1P84550 965 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 MPP3Q13368 585 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 OLIG2Q13516 323 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 IHHQ14623 411 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 FNBP1LQ5T0N5 605 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 KDELC1Q6UW63 502 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 IPMKQ8NFU5 416 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 TADA1Q96BN2 335 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 MRGPRX3Q96LB0 322 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 NUDCD1Q96RS6 583 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 FRMD8Q9BZ67 464 aaPredicted RBP17.82■□□□□ 0.44
UPF3A-206ENST00000480362 LRRC40Q9H9A6 602 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 ARFGAP3Q9NP61 516 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 SCUBE2Q9NQ36 999 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 TRPV5Q9NQA5 729 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 VPS45Q9NRW7 570 aa17.82■□□□□ 0.44
UPF3A-206ENST00000480362 TBC1D3BA6NDS4 549 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 INSIG1O15503 277 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 USP12O75317 370 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 PPFIA2O75334 1257 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 ZNF821O75541 412 aaPredicted RBP17.81■□□□□ 0.44
UPF3A-206ENST00000480362 SRPRAP08240 638 aaKnown RBP17.81■□□□□ 0.44
UPF3A-206ENST00000480362 DLDP09622 509 aaKnown RBP17.81■□□□□ 0.44
UPF3A-206ENST00000480362 DHX9Q08211 1270 aaKnown RBP17.81■□□□□ 0.44
UPF3A-206ENST00000480362 HIF1AQ16665 826 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 ACCSLQ4AC99 568 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 PREPLQ4J6C6 727 aaPredicted RBP17.81■□□□□ 0.44
UPF3A-206ENST00000480362 DGKKQ5KSL6 1271 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 ATXN7L2Q5T6C5 722 aaPredicted RBP17.81■□□□□ 0.44
UPF3A-206ENST00000480362 CENPUQ71F23 418 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 ZNF534Q76KX8 674 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 SRLQ86TD4 932 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 CAND1Q86VP6 1230 aaKnown RBP17.81■□□□□ 0.44
UPF3A-206ENST00000480362 PDIK1LQ8N165 341 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 TERB1Q8NA31 727 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 ISG20Q96AZ6 181 aaKnown RBP17.81■□□□□ 0.44
UPF3A-206ENST00000480362 MRGPRX2Q96LB1 330 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 NSMCE3Q96MG7 304 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 SERPINB12Q96P63 405 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 TM6SF2Q9BZW4 377 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 TNKS2Q9H2K2 1166 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 NOD2Q9HC29 1040 aa17.81■□□□□ 0.44
UPF3A-206ENST00000480362 MIA3Q5JRA6 1907 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 LOC730098B7Z3J9 87 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 AVILO75366 819 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 KAT7O95251 611 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 AGTP01019 485 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 APODP05090 189 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 SERPINF2P08697 491 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 NNMTP40261 264 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 GRIA2P42262 883 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 TNNT3P45378 269 aaPredicted RBP17.8■□□□□ 0.44
UPF3A-206ENST00000480362 VASPP50552 380 aaPredicted RBP17.8■□□□□ 0.44
UPF3A-206ENST00000480362 GALK1P51570 392 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 WNT3AP56704 352 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 PDIA2Q13087 525 aaKnown RBP17.8■□□□□ 0.44
UPF3A-206ENST00000480362 MTM1Q13496 603 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 SLMAPQ14BN4 828 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 EIF4HQ15056 248 aaKnown RBP17.8■□□□□ 0.44
UPF3A-206ENST00000480362 DLG2Q15700 870 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 PCSK7Q16549 785 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 PTPRNQ16849 979 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 MSS51Q4VC12 460 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 NAPEPLDQ6IQ20 393 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 C22orf39Q6P5X5 142 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 LRRC8BQ6P9F7 803 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 NCEH1Q6PIU2 408 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 CEP128Q6ZU80 1094 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 KDELC2Q7Z4H8 507 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 TMC3Q7Z5M5 1100 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 SFTPA1Q8IWL2 248 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 OR52K1Q8NGK4 314 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 TBL1YQ9BQ87 522 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 APOL2Q9BQE5 337 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 FICDQ9BVA6 458 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 CEP44Q9C0F1 390 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 FBRSL1Q9HCM7 1045 aaKnown RBP17.8■□□□□ 0.44
UPF3A-206ENST00000480362 XAB2Q9HCS7 855 aaKnown RBP17.8■□□□□ 0.44
UPF3A-206ENST00000480362 SAYSD1Q9NPB0 183 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 PLA2G4CQ9UP65 541 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 TICRRQ7Z2Z1 1910 aa17.8■□□□□ 0.44
UPF3A-206ENST00000480362 KIAA1549LQ6ZVL6 1849 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 EIF3HO15372 352 aaKnown RBP eCLIP17.79■□□□□ 0.445e-6■■■□□ 14.9
UPF3A-206ENST00000480362 ATP9BO43861 1147 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 BANF1O75531 89 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms