RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 ITGB3P05106 788 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 TCF7P36402 384 aaPredicted RBP6.46□□□□□ -1.38
PBRM1-220ENST00000480064 SKIV2L2P42285 1042 aaKnown RBP6.46□□□□□ -1.38
PBRM1-220ENST00000480064 BLKP51451 505 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 PDE1AP54750 535 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 CSE1LP55060 971 aaKnown RBP6.46□□□□□ -1.38
PBRM1-220ENST00000480064 SLC37A1P57057 533 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 E2F1Q01094 437 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 ITIH3Q06033 890 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 DDR1Q08345 913 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 KIAA2012Q0VF49 1180 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 NFE2L1Q14494 772 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 ERCC6LQ2NKX8 1250 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 SMU1Q2TAY7 513 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 LETM2Q2VYF4 491 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 CRY2Q49AN0 593 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 PDCD4Q53EL6 469 aaKnown RBP6.46□□□□□ -1.38
PBRM1-220ENST00000480064 TREML2Q5T2D2 321 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 JADE1Q6IE81 842 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 CPLX2Q6PUV4 134 aaKnown RBP6.46□□□□□ -1.38
PBRM1-220ENST00000480064 PARS2Q7L3T8 475 aaKnown RBP6.46□□□□□ -1.38
PBRM1-220ENST00000480064 GPAT4Q86UL3 456 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 PSPC1Q8WXF1 523 aaKnown RBP6.46□□□□□ -1.38
PBRM1-220ENST00000480064 AKAP1Q92667 903 aaKnown RBP eCLIP6.46□□□□□ -1.38
PBRM1-220ENST00000480064 TMCO6Q96DC7 493 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 CFAP57Q96MR6 1250 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 PRR25Q96S07 402 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 FERMT1Q9BQL6 677 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 RNF26Q9BY78 433 aaPredicted RBP6.46□□□□□ -1.38
PBRM1-220ENST00000480064 TMPRSS5Q9H3S3 457 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 SLC6A13Q9NSD5 602 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 ABHD10Q9NUJ1 306 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 DDX43Q9NXZ2 648 aaKnown RBP6.46□□□□□ -1.38
PBRM1-220ENST00000480064 TRPM5Q9NZQ8 1165 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 LRIT1Q9P2V4 623 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 AAR2Q9Y312 384 aaKnown RBP6.46□□□□□ -1.38
PBRM1-220ENST00000480064 CLSPNQ9HAW4 1339 aa6.46□□□□□ -1.38
PBRM1-220ENST00000480064 OR6C68A6NDL8 312 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 LRRC72A6NJI9 287 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 ZNF185O15231 689 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 NXPH3O95157 252 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 ONECUT2O95948 504 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 ADAP00813 363 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 ALDOCP09972 364 aaKnown RBP6.45□□□□□ -1.38
PBRM1-220ENST00000480064 HOXB9P17482 250 aaPredicted RBP6.45□□□□□ -1.38
PBRM1-220ENST00000480064 PIP4K2AP48426 406 aaPredicted RBP6.45□□□□□ -1.38
PBRM1-220ENST00000480064 NPY4RP50391 375 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 GALCP54803 685 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 TAP1Q03518 808 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 RUNX2Q13950 521 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 C5orf22Q49AR2 442 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 PARP10Q53GL7 1025 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 COLEC12Q5KU26 742 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 SP5Q6BEB4 398 aaPredicted RBP6.45□□□□□ -1.38
PBRM1-220ENST00000480064 RAB12Q6IQ22 244 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 AADACL2Q6P093 401 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 TATDN1Q6P1N9 297 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 ERN2Q76MJ5 926 aaKnown RBP6.45□□□□□ -1.38
PBRM1-220ENST00000480064 MAVSQ7Z434 540 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 GDF7Q7Z4P5 450 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 CTCFLQ8NI51 663 aaPredicted RBP6.45□□□□□ -1.38
PBRM1-220ENST00000480064 C2CD4CQ8TF44 421 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 SGCDQ92629 289 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 FKBP10Q96AY3 582 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 ELMOD3Q96FG2 381 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 PRR11Q96HE9 360 aaPredicted RBP6.45□□□□□ -1.38
PBRM1-220ENST00000480064 CABS1Q96KC9 395 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 FYTTD1Q96QD9 318 aaKnown RBP6.45□□□□□ -1.38
PBRM1-220ENST00000480064 TRIM2Q9C040 744 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 PLK3Q9H4B4 646 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 KIF9Q9HAQ2 790 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 GALNT9Q9HCQ5 603 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 ASAH2Q9NR71 780 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 TBCCD1Q9NVR7 557 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 EPS15L1Q9UBC2 864 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 HDAC6Q9UBN7 1215 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 TUBE1Q9UJT0 475 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 AGTPBP1Q9UPW5 1226 aa6.45□□□□□ -1.38
PBRM1-220ENST00000480064 ZNF644Q9H582 1327 aaPredicted RBP6.45□□□□□ -1.38
PBRM1-220ENST00000480064 TCRBV21S2A2A0A5A6 115 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 CCDC69A6NI79 296 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 CAPN14A8MX76 684 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 AP4M1O00189 453 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 DSCR3O14972 297 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 RECQL5O94762 991 aaPredicted RBP6.44□□□□□ -1.38
PBRM1-220ENST00000480064 ZFPL1O95159 310 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 KAT7O95251 611 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 C1RP00736 705 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 ERBB2P04626 1255 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 ATF7P17544 494 aaPredicted RBP6.44□□□□□ -1.38
PBRM1-220ENST00000480064 PON1P27169 355 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 HOXA13P31271 388 aaPredicted RBP6.44□□□□□ -1.38
PBRM1-220ENST00000480064 HPDP32754 393 aaPredicted RBP6.44□□□□□ -1.38
PBRM1-220ENST00000480064 CCR10P46092 362 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 POLGP54098 1239 aaPredicted RBP6.44□□□□□ -1.38
PBRM1-220ENST00000480064 MRPS35P82673 323 aaKnown RBP6.44□□□□□ -1.38
PBRM1-220ENST00000480064 SHC2P98077 582 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 TFAP4Q01664 338 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 ACSM2AQ08AH3 577 aa6.44□□□□□ -1.38
PBRM1-220ENST00000480064 MORF4L2Q15014 288 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms