RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 E4F1Q66K89 784 aaPredicted RBP17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 SLC25A45Q8N413 288 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 HNRNPLLQ8WVV9 542 aaKnown RBP17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 VOPP1Q96AW1 172 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 HMCESQ96FZ2 354 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 CRELD1Q96HD1 420 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 PPP1R16AQ96I34 528 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 BMFQ96LC9 184 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 KLHL32Q96NJ5 620 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 FADS3Q9Y5Q0 445 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 SHROOM3Q8TF72 1996 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 IGLON5A6NGN9 336 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 SIGLEC16A6NMB1 481 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 C16orf96A6NNT2 1141 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 INSIG1O15503 277 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 SPINT1O43278 529 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 BUB1O43683 1085 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 SIGLEC6O43699 453 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 TMCC1O94876 653 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 ITGB7P26010 798 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 EPHB2P29323 1055 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 RXRGP48443 463 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 MAPKAPK2P49137 400 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 NRG1Q02297 640 aaPredicted RBP17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 SEMG2Q02383 582 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 CA9Q16790 459 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 HES3Q5TGS1 186 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 Q6ZSR6 202 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 MCOLN2Q8IZK6 566 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 HDAC8Q9BY41 377 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 TRIM7Q9C029 511 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 CEP44Q9C0F1 390 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 ERVMER34-1Q9H9K5 563 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 FZD10Q9ULW2 581 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 ANKRD11Q6UB99 2663 aaPredicted RBP17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 APC2O95996 2303 aa17.67■□□□□ 0.42
ECHDC1-216ENST00000479525 LRRC53A6NM62 1247 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 DGKAP23743 735 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 GSCP56915 257 aaPredicted RBP17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 TCEA2Q15560 299 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 COL28A1Q2UY09 1125 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 EFHC2Q5JST6 749 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 PPP1R15BQ5SWA1 713 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 ACAD10Q6JQN1 1059 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 CAVIN1Q6NZI2 390 aaKnown RBP17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 IRF2BP2Q7Z5L9 587 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 IQCHQ86VS3 1027 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 GALNT15Q8N3T1 639 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 NTAN1Q96AB6 310 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 CELF6Q96J87 481 aaKnown RBP17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 SLC17A9Q9BYT1 436 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 DNAJC28Q9NX36 388 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 ZFYVE26Q68DK2 2539 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 RASA4BC9J798 803 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 NEMP1O14524 444 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 YKT6O15498 198 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 RASA4O43374 803 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 PIGNO95427 931 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 JUPP14923 745 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 FERP16591 822 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 TNFAIP3P21580 790 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 ZNF143P52747 638 aaPredicted RBP17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 C1QBPQ07021 282 aaKnown RBP17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 TARDBPQ13148 414 aaKnown RBP eCLIP17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 ACBD5Q5T8D3 534 aaPredicted RBP17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 DCUN1D2Q6PH85 259 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 OXR1Q8N573 874 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 RTL3Q8N8U3 475 aaKnown RBP17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 OR2AP1Q8NGE2 309 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 TSC1Q92574 1164 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 DCBLD2Q96PD2 775 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 PEBP4Q96S96 227 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 MAGEH1Q9H213 219 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 PCSK1NQ9UHG2 260 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 HPCAL4Q9UM19 191 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 COQ6Q9Y2Z9 468 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 GPSM3Q9Y4H4 160 aa17.66■□□□□ 0.42
ECHDC1-216ENST00000479525 ITPR1Q14643 2758 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 ACACAQ13085 2346 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 LRRC10BA6NIK2 292 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 KDELR3O43731 214 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 MAGEC1O60732 1142 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 MBD3O95983 291 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 PRKCGP05129 697 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 SKILP12757 684 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 NUDT1P36639 197 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 SNRPD1P62314 119 aaKnown RBP17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 SLC20A2Q08357 652 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 MYLK3Q32MK0 819 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 PROX2Q3B8N5 592 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 NYAP1Q6ZVC0 841 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 FEM1CQ96JP0 617 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 NAP1L5Q96NT1 182 aaPredicted RBP17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 SYT11Q9BT88 431 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 WRAP53Q9BUR4 548 aaKnown RBP17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 KLF15Q9UIH9 416 aa17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 TPX2Q9ULW0 747 aaKnown RBP17.65■□□□□ 0.42
ECHDC1-216ENST00000479525 LOC400499M0QZD8 3231 aa17.64■□□□□ 0.42
ECHDC1-216ENST00000479525 FAM208BQ5VWN6 2430 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 LRP4O75096 1905 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms