RNA–Protein interactions for RNA: ENST00000479389.1

RIPK1-203, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

TSL 3

Gene RIPK1, Length 1,481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-203ENST00000479389 ZNF354CQ86Y25 554 aa16.56■□□□□ 0.24
RIPK1-203ENST00000479389 PYROXD2Q8N2H3 581 aa16.56■□□□□ 0.24
RIPK1-203ENST00000479389 RTL3Q8N8U3 475 aaKnown RBP16.56■□□□□ 0.24
RIPK1-203ENST00000479389 HAUS4Q9H6D7 363 aa16.56■□□□□ 0.24
RIPK1-203ENST00000479389 FZD3Q9NPG1 666 aa16.56■□□□□ 0.24
RIPK1-203ENST00000479389 ZFR2Q9UPR6 939 aaKnown RBP16.56■□□□□ 0.24
RIPK1-203ENST00000479389 DMXL2Q8TDJ6 3036 aa16.56■□□□□ 0.24
RIPK1-203ENST00000479389 ARID1BQ8NFD5 2236 aaPredicted RBP16.56■□□□□ 0.24
RIPK1-203ENST00000479389 CHD6Q8TD26 2715 aa16.56■□□□□ 0.24
RIPK1-203ENST00000479389 ZSCAN5CA6NGD5 496 aaPredicted RBP16.55■□□□□ 0.24
RIPK1-203ENST00000479389 KDELR3O43731 214 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 CREB3O43889 395 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 GSRP00390 522 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 THEGLP0DJG4 465 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 AIF1P55008 147 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 SNRPD1P62314 119 aaKnown RBP16.55■□□□□ 0.24
RIPK1-203ENST00000479389 RPS21P63220 83 aaKnown RBP16.55■□□□□ 0.24
RIPK1-203ENST00000479389 TMEM259Q4ZIN3 620 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 SEL1L3Q68CR1 1132 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 KIAA1161Q6NSJ0 714 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 LEKR1Q6ZMV7 388 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 PARS2Q7L3T8 475 aaKnown RBP16.55■□□□□ 0.24
RIPK1-203ENST00000479389 OR2AP1Q8NGE2 309 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 OR6K2Q8NGY2 324 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 LRIG1Q96JA1 1093 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 VCPIP1Q96JH7 1222 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 FEM1CQ96JP0 617 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 EPAS1Q99814 870 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 IFNKQ9P0W0 207 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 FZD10Q9ULW2 581 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 FREM2Q5SZK8 3169 aa16.55■□□□□ 0.24
RIPK1-203ENST00000479389 A0A1W2PQJ5 194 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 KRIT1O00522 736 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 BUB1O43683 1085 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 AP1G1O43747 822 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 KLHL30Q0D2K2 578 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
RIPK1-203ENST00000479389 SMAD1Q15797 465 aaKnown RBP16.54■□□□□ 0.24
RIPK1-203ENST00000479389 DHRS13Q6UX07 377 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 CALN1Q9BXU9 219 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 CCDC86Q9H6F5 360 aaKnown RBP16.54■□□□□ 0.24
RIPK1-203ENST00000479389 CATSPERBQ9H7T0 1116 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 PCDHGA1Q9Y5H4 931 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 FADS3Q9Y5Q0 445 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 ZFHX4Q86UP3 3567 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 TMCO5BA8MYB1 307 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 SDC3O75056 442 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 POP4O95707 220 aaKnown RBP16.54■□□□□ 0.24
RIPK1-203ENST00000479389 CAPNS1P04632 268 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 SKILP12757 684 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 GKP32189 559 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 CLDN2P57739 230 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 YBEYP58557 167 aaPredicted RBP16.54■□□□□ 0.24
RIPK1-203ENST00000479389 DNAJC3Q13217 504 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 ZNF805Q5CZA5 627 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 KANSL1Q7Z3B3 1105 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 TMC6Q7Z403 805 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 PROSER1Q86XN7 944 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 OR13H1Q8NG92 308 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 FAM174AQ8TBP5 190 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 RAB7BQ96AH8 199 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 OSBPL1AQ9BXW6 950 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 SLC17A9Q9BYT1 436 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 NOL6Q9H6R4 1146 aaKnown RBP16.54■□□□□ 0.24
RIPK1-203ENST00000479389 PARVAQ9NVD7 372 aa16.54■□□□□ 0.24
RIPK1-203ENST00000479389 C16orf96A6NNT2 1141 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 A6NNZ2 444 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 DDX3XO00571 662 aaKnown RBP eCLIP16.53■□□□□ 0.243e-17■■■■■ 41
RIPK1-203ENST00000479389 RFPL3O75679 317 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 TMCC1O94876 653 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 UGT2B4P06133 528 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 C1SP09871 688 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 CDK4P11802 303 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 GZMAP12544 262 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 OGDHQ02218 1023 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 MAMLD1Q13495 774 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 MYLK3Q32MK0 819 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 PARP15Q460N3 678 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 ATXN7L2Q5T6C5 722 aaPredicted RBP16.53■□□□□ 0.24
RIPK1-203ENST00000479389 GCNT7Q6ZNI0 430 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 ABI3BPQ7Z7G0 1075 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 ZSCAN30Q86W11 494 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 MARCH9Q86YJ5 346 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 CASKIN2Q8WXE0 1202 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 SYN2Q92777 582 aaPredicted RBP16.53■□□□□ 0.24
RIPK1-203ENST00000479389 IQCDQ96DY2 449 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 GDAP1L1Q96MZ0 367 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 TSPY26PQ9H489 355 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 KLHL11Q9NVR0 708 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 CAPN11Q9UMQ6 739 aa16.53■□□□□ 0.24
RIPK1-203ENST00000479389 ANKRD11Q6UB99 2663 aaPredicted RBP16.53■□□□□ 0.24
RIPK1-203ENST00000479389 PKD1L2Q7Z442 2459 aa16.52■□□□□ 0.24
RIPK1-203ENST00000479389 FAM149AA5PLN7 773 aa16.52■□□□□ 0.23
RIPK1-203ENST00000479389 WASH4PA8MWX3 477 aa16.52■□□□□ 0.23
RIPK1-203ENST00000479389 RASA4BC9J798 803 aa16.52■□□□□ 0.23
RIPK1-203ENST00000479389 TAF4O00268 1085 aa16.52■□□□□ 0.23
RIPK1-203ENST00000479389 NEMP1O14524 444 aa16.52■□□□□ 0.23
RIPK1-203ENST00000479389 FGF10O15520 208 aaPredicted RBP16.52■□□□□ 0.23
RIPK1-203ENST00000479389 RASA4O43374 803 aa16.52■□□□□ 0.23
RIPK1-203ENST00000479389 TSPAN6O43657 245 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms