RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 TAGLN3Q9UI15 199 aa11.1□□□□□ -0.63
EWSR1-216ENST00000479135 ERGIC3Q9Y282 383 aa11.1□□□□□ -0.63
EWSR1-216ENST00000479135 PCDHGA1Q9Y5H4 931 aa11.1□□□□□ -0.63
EWSR1-216ENST00000479135 CEP170Q5SW79 1584 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 MFSD11O43934 449 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 OR10H3O60404 316 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 NPEPPSP55786 919 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 KLHL35Q6PF15 583 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 DQX1Q8TE96 717 aaKnown RBP11.09□□□□□ -0.63
EWSR1-216ENST00000479135 TBCCD1Q9NVR7 557 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 RBAKQ9NYW8 714 aaPredicted RBP11.09□□□□□ -0.63
EWSR1-216ENST00000479135 EMSYQ7Z589 1322 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 PRDM15P57071 1507 aaPredicted RBP11.09□□□□□ -0.63
EWSR1-216ENST00000479135 USP17L3A6NCW0 530 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 USP17L4A6NCW7 530 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 SRRM3A6NNA2 597 aaPredicted RBP11.09□□□□□ -0.63
EWSR1-216ENST00000479135 NDUFB10O96000 172 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 USP17L1Q7RTZ2 530 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 OAFQ86UD1 273 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 ZFP3Q96NJ6 502 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 BEX2Q9BXY8 128 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 NLNQ9BYT8 704 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 CPVLQ9H3G5 476 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 PRDM16Q9HAZ2 1276 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 BEX1Q9HBH7 125 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 EIF4G3O43432 1585 aaKnown RBP11.09□□□□□ -0.63
EWSR1-216ENST00000479135 TXNDC12O95881 172 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 HARS2P49590 506 aaKnown RBP11.09□□□□□ -0.63
EWSR1-216ENST00000479135 BMPR2Q13873 1038 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 C11orf63Q6NUN7 778 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 SLC30A6Q6NXT4 461 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 TMED8Q6PL24 325 aaPredicted RBP11.09□□□□□ -0.63
EWSR1-216ENST00000479135 BRINP3Q76B58 766 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 OXR1Q8N573 874 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 NDUFA13Q9P0J0 144 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 CKLFQ9UBR5 152 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 AP4E1Q9UPM8 1137 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 FANCAO15360 1455 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 TPST2O60704 377 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 GATBO75879 557 aaKnown RBP11.09□□□□□ -0.63
EWSR1-216ENST00000479135 PHKG2P15735 406 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 HK1P19367 917 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 GPR15P49685 360 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 ACOT2P49753 483 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 SERPINB9P50453 376 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 BNIP3Q12983 259 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 CBWD3Q5JTY5 395 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 CBWD5Q5RIA9 395 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 UBE2UQ5VVX9 321 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 OGFOD2Q6N063 350 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 RAB43Q86YS6 212 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 TMEM132CQ8N3T6 1108 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 CHP1Q99653 195 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 ENY2Q9NPA8 101 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 PNO1Q9NRX1 252 aaKnown RBP11.09□□□□□ -0.63
EWSR1-216ENST00000479135 NAGPAQ9UK23 515 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 GNEQ9Y223 722 aaKnown RBP11.09□□□□□ -0.63
EWSR1-216ENST00000479135 FAM196BA6NMK8 535 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 EPHB2P29323 1055 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 PHKA2P46019 1235 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 TNFRSF25Q93038 417 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 CIPCQ9C0C6 399 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 GPATCH2Q9NW75 528 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 OR6C70A6NIJ9 312 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 MIF4GDA9UHW6 222 aaKnown RBP11.09□□□□□ -0.63
EWSR1-216ENST00000479135 FAM86B1E9PN63 330 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 CES2O00748 559 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 TOR1BO14657 336 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 IFNA2P01563 188 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 CYP17A1P05093 508 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 CCNYL3P0C7X3 344 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 COX7A2P14406 83 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 ENPEPQ07075 957 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 E2F2Q14209 437 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 ZCCHC23Q6ZST2 131 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 STRA8Q7Z7C7 330 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 C8orf48Q96LL4 319 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 ZNF597Q96LX8 424 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 EQTNQ9NQ60 294 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 PXMP2Q9NR77 195 aa11.09□□□□□ -0.63
EWSR1-216ENST00000479135 PLEKHG1Q9ULL1 1385 aa11.08□□□□□ -0.63
EWSR1-216ENST00000479135 FAM187AA6NFU0 413 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 PRPF3O43395 683 aaKnown RBP11.08□□□□□ -0.64
EWSR1-216ENST00000479135 MAGEB1P43366 347 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 TAS2R39P59534 338 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 TLR1Q15399 786 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 PCID2Q5JVF3 399 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 CENPSQ8N2Z9 138 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 SNX33Q8WV41 574 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 NSMCE3Q96MG7 304 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 IRX2Q9BZI1 471 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-216ENST00000479135 TUBA8Q9NY65 449 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-216ENST00000479135 CXXC1Q9P0U4 656 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-216ENST00000479135 GTF3C4Q9UKN8 822 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 A0A1W2PP64 1363 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 CACNB4O00305 520 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-216ENST00000479135 SHOXO15266 292 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 RAD51CO43502 376 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 PHF2O75151 1096 aa11.08□□□□□ -0.64
EWSR1-216ENST00000479135 SMARCB1Q12824 385 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms