RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 DRC3Q9H069 523 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 NDFIP2Q9NV92 336 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 ABI2Q9NYB9 513 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-212ENST00000477970 ZNF212Q9UDV6 495 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 DNAJB4Q9UDY4 337 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 MARCOQ9UEW3 520 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-212ENST00000477970 TLK1Q9UKI8 766 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 KIAA0100Q14667 2235 aaKnown RBP12.37□□□□□ -0.43
PTPRF-212ENST00000477970 B2RBV5 119 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 SLCO1B7G3V0H7 640 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 MT-CYBP00156 380 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-212ENST00000477970 AHSGP02765 367 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 SLC35E2BP0CK96 405 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 GABRB3P28472 473 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 IRX4P78413 519 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 IRF9Q00978 393 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 ASPHQ12797 758 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 MSLNQ13421 630 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-212ENST00000477970 TRMT5Q32P41 509 aaKnown RBP12.37□□□□□ -0.43
PTPRF-212ENST00000477970 C5orf22Q49AR2 442 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 RFWD3Q6PCD5 774 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 RBM15BQ8NDT2 890 aaKnown RBP12.37□□□□□ -0.43
PTPRF-212ENST00000477970 USP33Q8TEY7 942 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 PEX13Q92968 403 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 AZIN2Q96A70 460 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 TSNARE1Q96NA8 513 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 UBP1Q9NZI7 540 aa12.37□□□□□ -0.43
PTPRF-212ENST00000477970 HEATR9A2RTY3 570 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 PRR5-ARHGAP8B1AHC4 643 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 TBC1D4O60343 1298 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 ENO1P06733 434 aaKnown RBP12.36□□□□□ -0.43
PTPRF-212ENST00000477970 CPOXP36551 454 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 PGM1P36871 562 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 KPNA2P52292 529 aaKnown RBP12.36□□□□□ -0.43
PTPRF-212ENST00000477970 RAB10P61026 200 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 ARHGAP8P85298 464 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 POU4F1Q01851 419 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 ZNF280DQ6N043 979 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 SCN4BQ8IWT1 228 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 IPMKQ8NFU5 416 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 SPPL2BQ8TCT7 592 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 CALML6Q8TD86 181 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 PGLYRP2Q96PD5 576 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 ACE2Q9BYF1 805 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-212ENST00000477970 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTPRF-212ENST00000477970 RAP2CQ9Y3L5 183 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 SBK3P0C264 359 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 OR4Q2P0C623 313 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 ZDHHC11BP0C7U3 371 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 MAPKAPK2P49137 400 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 KPNA1P52294 538 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-212ENST00000477970 ALDH18A1P54886 795 aaKnown RBP12.36□□□□□ -0.43
PTPRF-212ENST00000477970 BTKQ06187 659 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 PARP15Q460N3 678 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 GPR78Q96P69 363 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 FSD1LQ9BXM9 530 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 GPAMQ9HCL2 828 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 PNPOQ9NVS9 261 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 ZNF358Q9NW07 568 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 STOML1Q9UBI4 398 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 VTI1BQ9UEU0 232 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 CHD5Q8TDI0 1954 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 TNRC18O15417 2968 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-212ENST00000477970 DIAPH2O60879 1101 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 MYCP01106 439 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-212ENST00000477970 YWHAQP27348 245 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 ADSLP30566 484 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-212ENST00000477970 OR1G1P47890 313 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 DNAJB13P59910 316 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 IL10RBQ08334 325 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 FSCBQ5H9T9 825 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 TTC8Q8TAM2 541 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 CNDP1Q96KN2 507 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 FAM193BQ96PV7 902 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-212ENST00000477970 CAB39LQ9H9S4 337 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 BATF3Q9NR55 127 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 TLR8Q9NR97 1041 aaKnown RBP12.36□□□□□ -0.43
PTPRF-212ENST00000477970 GMIPQ9P107 970 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 STX18Q9P2W9 335 aaKnown RBP12.36□□□□□ -0.43
PTPRF-212ENST00000477970 SLC39A10Q9ULF5 831 aa12.36□□□□□ -0.43
PTPRF-212ENST00000477970 ENTPD5O75356 428 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 TADA2AO75478 443 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 YBEYP58557 167 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 LAMB3Q13751 1172 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 RCN2Q14257 317 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 USP10Q14694 798 aaKnown RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 KHDC1Q4VXA5 237 aaKnown RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 NAPRTQ6XQN6 538 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 SCUBE1Q8IWY4 988 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 CENPLQ8N0S6 344 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 PAWRQ96IZ0 340 aaKnown RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 TMEM175Q9BSA9 504 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 RIMKLBQ9ULI2 386 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 ACOT9Q9Y305 439 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 LIN7AO14910 233 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 NPHS1O60500 1241 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 PSMG1O95456 288 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 HSPA4LO95757 839 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 GLDCP23378 1020 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms