RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ESRP1Q6NXG1 681 aaKnown RBP20.63■□□□□ 0.89
PDLIM1-202ENST00000477757 ARL10Q8N8L6 244 aa20.63■□□□□ 0.89
PDLIM1-202ENST00000477757 ASNSD1Q9NWL6 643 aa20.63■□□□□ 0.89
PDLIM1-202ENST00000477757 IGLON5A6NGN9 336 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 YY2O15391 372 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 MED7O43513 233 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 TSPAN6O43657 245 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 HSF2BPO75031 334 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 HGFP14210 728 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 CCKBRP32239 447 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 THOP1P52888 689 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 LRRC63Q05C16 580 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 PTK2BQ14289 1009 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 ALFQ53S48 1182 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 SETD3Q86TU7 594 aaPredicted RBP20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 KYQ8NBH2 561 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 CCDC74AQ96AQ1 378 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 PPP1R13BQ96KQ4 1090 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 SPATA32Q96LK8 384 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 KREMEN1Q96MU8 473 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 GFM1Q96RP9 751 aaKnown RBP20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 FOXP3Q9BZS1 431 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 SLC13A1Q9BZW2 595 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 CEP44Q9C0F1 390 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 CLPBQ9H078 707 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 SEPT10Q9P0V9 454 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 SEPT3Q9UH03 358 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 RABGEF1Q9UJ41 708 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 MYO9AB2RTY4 2548 aa20.62■□□□□ 0.89
PDLIM1-202ENST00000477757 A0A0D9SEW6 157 aa20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 GP1BBP13224 206 aa20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 TSHRP16473 764 aa20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 SERPINH1P50454 418 aaKnown RBP20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 NME3Q13232 169 aa20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 MANEAQ5SRI9 462 aa20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 VASH2Q86V25 355 aa20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 ZNF683Q8IZ20 524 aa20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 PCDH20Q8N6Y1 951 aaKnown RBP20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 HEPHQ9BQS7 1158 aa20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 FUCA2Q9BTY2 467 aa20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 SIK2Q9H0K1 926 aa20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 SLC25A18Q9H1K4 315 aa20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 GEMIN8Q9NWZ8 242 aaKnown RBP20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 PISDQ9UG56 409 aa20.61■□□□□ 0.89
PDLIM1-202ENST00000477757 TRIM49BA6NDI0 452 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 P4HA2O15460 535 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 ENDOD1O94919 500 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 JMJD7P0C870 316 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 KRT5P13647 590 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 IGFALSP35858 605 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 ABL2P42684 1182 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 CCNHP51946 323 aaPredicted RBP20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 CETN1Q12798 172 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 UBAP2LQ14157 1087 aaKnown RBP20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 MACC1Q6ZN28 852 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 ZSCAN1Q8NBB4 408 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 HTR3CQ8WXA8 447 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 RAB7BQ96AH8 199 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 TMEM74Q96NL1 305 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 GOLPH3LQ9H4A5 285 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 RMND1Q9NWS8 449 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 LOXL2Q9Y4K0 774 aa20.6■□□□□ 0.89
PDLIM1-202ENST00000477757 A0A1W2PQM1 296 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 M0QYT0 321 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 LETM1O95202 739 aaPredicted RBP20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 ADCY5O95622 1261 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 RPLP0P05388 317 aaKnown RBP20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 WT1P19544 449 aaPredicted RBP20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 YPEL5P62699 121 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 EFHC1Q5JVL4 640 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 ZNF658Q5TYW1 1059 aaPredicted RBP20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 OTUD1Q5VV17 481 aaPredicted RBP20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 RETSATQ6NUM9 610 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 TFAP2DQ7Z6R9 452 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 SDR16C5Q8N3Y7 309 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 FSTL5Q8N475 847 aaPredicted RBP20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 PCDH19Q8TAB3 1148 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 ZNF606Q8WXB4 792 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 CENPTQ96BT3 561 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 CPXM1Q96SM3 734 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 CPEB1Q9BZB8 566 aaKnown RBP20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 GGT7Q9UJ14 662 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 ITM2BQ9Y287 266 aa20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 SPTAN1Q13813 2472 aaKnown RBP20.59■□□□□ 0.89
PDLIM1-202ENST00000477757 PRAMEF33A0A0G2JMD5 474 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 NEMP1O14524 444 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 THAP12O43422 761 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 PRAMEF10O60809 474 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 DAB1O75553 588 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 GRAP2O75791 330 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 ZMPSTE24O75844 475 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 CELA2BP08218 269 aaPredicted RBP20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 CCL7P80098 99 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 CLCA4Q14CN2 919 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 CARD16Q5EG05 197 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 FAXCQ5TGI0 409 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 LVRNQ6Q4G3 990 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 OR7D4Q8NG98 312 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 ADNPQ9H2P0 1102 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 ZDHHC6Q9H6R6 413 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms