RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 STBD1O95210 358 aa14.8□□□□□ -0.04
HDAC6-220ENST00000477528 ATP6V1B1P15313 513 aa14.8□□□□□ -0.04
HDAC6-220ENST00000477528 KCNE1P15382 129 aa14.8□□□□□ -0.04
HDAC6-220ENST00000477528 IVDP26440 423 aa14.8□□□□□ -0.04
HDAC6-220ENST00000477528 POLD2P49005 469 aa14.8□□□□□ -0.04
HDAC6-220ENST00000477528 THEMIS2Q5TEJ8 643 aa14.8□□□□□ -0.04
HDAC6-220ENST00000477528 FAM162AQ96A26 154 aa14.8□□□□□ -0.04
HDAC6-220ENST00000477528 MFSD3Q96ES6 412 aa14.8□□□□□ -0.04
HDAC6-220ENST00000477528 CCDC90BQ9GZT6 254 aa14.8□□□□□ -0.04
HDAC6-220ENST00000477528 STX18Q9P2W9 335 aaKnown RBP14.8□□□□□ -0.04
HDAC6-220ENST00000477528 NDUFAF1Q9Y375 327 aa14.8□□□□□ -0.04
HDAC6-220ENST00000477528 SHANK3Q9BYB0 1731 aa14.8□□□□□ -0.04
HDAC6-220ENST00000477528 ANPEPP15144 967 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 TFEBP19484 476 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 SLC5A3P53794 718 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 MAXP61244 160 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 SAMD4BQ5PRF9 694 aaKnown RBP14.79□□□□□ -0.04
HDAC6-220ENST00000477528 TMCO4Q5TGY1 634 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 MIER2Q8N344 545 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 ADAM7Q9H2U9 754 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 CAAP1Q9H8G2 361 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 COG4Q9H9E3 785 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 DNMT3LQ9UJW3 386 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 A0A1W2PQH9 124 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 OR6C75A6NL08 312 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 TRIM16O95361 564 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 ATP6V1C1P21283 382 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 FMO4P31512 558 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 KRT33BQ14525 404 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 ADRM1Q16186 407 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 PPP1R15BQ5SWA1 713 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 OR56A4Q8NGH8 313 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 STAG3L4Q8TBR4 150 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 KCTD13Q8WZ19 329 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 PNPLA8Q9NP80 782 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 DYRK4Q9NR20 520 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 DNAJC28Q9NX36 388 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 ZMPSTE24O75844 475 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
HDAC6-220ENST00000477528 EPHA3P29320 983 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 BIRC2Q13490 618 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 AAGABQ6PD74 315 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 ITIH5Q86UX2 942 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 PTPRHQ9HD43 1115 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 HMX1Q9NP08 348 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-220ENST00000477528 POLG2Q9UHN1 485 aa14.79□□□□□ -0.04
HDAC6-220ENST00000477528 BAIAP3O94812 1187 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 ZNF7P17097 686 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-220ENST00000477528 FLT3LGP49771 235 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 PKNOX1P55347 436 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 SYPL2Q5VXT5 272 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 DHFR2Q86XF0 187 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 ZDHHC14Q8IZN3 488 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 PQLC3Q8N755 202 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 RBM15BQ8NDT2 890 aaKnown RBP14.78□□□□□ -0.04
HDAC6-220ENST00000477528 THUMPD3Q9BV44 507 aaKnown RBP14.78□□□□□ -0.04
HDAC6-220ENST00000477528 RNF39Q9H2S5 420 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 RUBCNLQ9H714 662 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 C16orf96A6NNT2 1141 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 BTN3A1O00481 513 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 MAGEC1O60732 1142 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 PROZP22891 400 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 GRB14Q14449 540 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 SQLEQ14534 574 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 SMPD4Q9NXE4 827 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 V9GYQ6 96 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 ZNF487B1APH4 448 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 CDK18Q07002 472 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 TMED1Q13445 227 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 HECTD3Q5T447 861 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 ZBTB49Q6ZSB9 765 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 TEKT5Q96M29 485 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 ADNPQ9H2P0 1102 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 UGT1A9O60656 530 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 FGF1P05230 155 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 PRKD1Q15139 912 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-220ENST00000477528 FSTL4Q6MZW2 842 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 TTC33Q6PID6 262 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-220ENST00000477528 ANKS3Q6ZW76 656 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 DDX53Q86TM3 631 aaKnown RBP14.78□□□□□ -0.04
HDAC6-220ENST00000477528 MPP5Q8N3R9 675 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 GANCQ8TET4 914 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 VPS50Q96JG6 964 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 HERPUD2Q9BSE4 406 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 DENND2DQ9H6A0 471 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-220ENST00000477528 UGT1A7Q9HAW7 530 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 UGT1A10Q9HAW8 530 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 UGT1A8Q9HAW9 530 aa14.78□□□□□ -0.04
HDAC6-220ENST00000477528 UXTQ9UBK9 157 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-220ENST00000477528 FAM159BA6NKW6 160 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 TM7SF2O76062 418 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 F2P00734 622 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 FGFR1P11362 822 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 FCGR1AP12314 374 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 HLA-DPA1P20036 260 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 ATP6AP1LQ52LC2 224 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 METTL21CQ5VZV1 264 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 EP400NLQ6ZTU2 488 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 DHDDSQ86SQ9 333 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 FAM9CQ8IZT9 166 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms