RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 FUT11Q495W5 492 aa29.24■■■□□ 2.27
VEGFA-211ENST00000476772 RETSATQ6NUM9 610 aa29.24■■■□□ 2.27
VEGFA-211ENST00000476772 CASC4Q6P4E1 433 aa29.24■■■□□ 2.27
VEGFA-211ENST00000476772 KDELC2Q7Z4H8 507 aa29.24■■■□□ 2.27
VEGFA-211ENST00000476772 MICALL1Q8N3F8 863 aa29.24■■■□□ 2.27
VEGFA-211ENST00000476772 NAT16Q8N8M0 369 aa29.24■■■□□ 2.27
VEGFA-211ENST00000476772 ZNF557Q8N988 423 aaPredicted RBP29.24■■■□□ 2.27
VEGFA-211ENST00000476772 EPS8L3Q8TE67 593 aaKnown RBP29.24■■■□□ 2.27
VEGFA-211ENST00000476772 ARL8AQ96BM9 186 aa29.24■■■□□ 2.27
VEGFA-211ENST00000476772 STAMBPL1Q96FJ0 436 aa29.24■■■□□ 2.27
VEGFA-211ENST00000476772 PLAC1Q9HBJ0 212 aa29.24■■■□□ 2.27
VEGFA-211ENST00000476772 ZFP14Q9HCL3 533 aa29.24■■■□□ 2.27
VEGFA-211ENST00000476772 GGA2Q9UJY4 613 aa29.24■■■□□ 2.27
VEGFA-211ENST00000476772 KIF26AQ9ULI4 1882 aaPredicted RBP29.23■■■□□ 2.27
VEGFA-211ENST00000476772 MIA3Q5JRA6 1907 aa29.23■■■□□ 2.27
VEGFA-211ENST00000476772 MLLT1Q03111 559 aaPredicted RBP29.23■■■□□ 2.27
VEGFA-211ENST00000476772 COL19A1Q14993 1142 aa29.23■■■□□ 2.27
VEGFA-211ENST00000476772 VITQ6UXI7 678 aa29.23■■■□□ 2.27
VEGFA-211ENST00000476772 RNF135Q8IUD6 432 aa29.23■■■□□ 2.27
VEGFA-211ENST00000476772 TMEM109Q9BVC6 243 aa29.23■■■□□ 2.27
VEGFA-211ENST00000476772 POMKQ9H5K3 350 aa29.23■■■□□ 2.27
VEGFA-211ENST00000476772 BFARQ9NZS9 450 aa29.23■■■□□ 2.27
VEGFA-211ENST00000476772 FCF1Q9Y324 198 aaKnown RBP29.23■■■□□ 2.27
VEGFA-211ENST00000476772 SMIM23A6NLE4 172 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 MYZAPP0CAP1 466 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 ADH5P11766 374 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 PABPC1P11940 636 aaKnown RBP29.22■■■□□ 2.27
VEGFA-211ENST00000476772 CR2P20023 1033 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 GBP2P32456 591 aaPredicted RBP29.22■■■□□ 2.27
VEGFA-211ENST00000476772 STAT4Q14765 748 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 LONRF1Q17RB8 773 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 CERCAMQ5T4B2 595 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 DENND5AQ6IQ26 1287 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 RANBP10Q6VN20 620 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 UNC5AQ6ZN44 842 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 FAM161BQ96MY7 647 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 TMBIM4Q9HC24 238 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 OGFRQ9NZT2 677 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 LHX3Q9UBR4 397 aa29.22■■■□□ 2.27
VEGFA-211ENST00000476772 GOLGA6L10A6NI86 522 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 K7ERQ8 282 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 SOX1O00570 391 aaPredicted RBP29.21■■■□□ 2.27
VEGFA-211ENST00000476772 ADH1CP00326 375 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 TPH1P17752 444 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 MTHFRP42898 656 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 SERPINH1P50454 418 aaKnown RBP29.21■■■□□ 2.27
VEGFA-211ENST00000476772 KRT222Q8N1A0 295 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 FBF1Q8TES7 1133 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 EBF3Q9H4W6 596 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 NOD2Q9HC29 1040 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 TRIOBPQ9H2D6 2365 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 TLDC2A0PJX2 215 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 AP3B1O00203 1094 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 HOXC11O43248 304 aaPredicted RBP29.21■■■□□ 2.27
VEGFA-211ENST00000476772 SPAG6O75602 509 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 OAS2P29728 719 aaKnown RBP29.21■■■□□ 2.27
VEGFA-211ENST00000476772 CTSOP43234 321 aaPredicted RBP29.21■■■□□ 2.27
VEGFA-211ENST00000476772 CHRNA4P43681 627 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 SLCO1A2P46721 670 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 NPY2RP49146 381 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 SCNN1BP51168 640 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 GEMIN4P57678 1058 aaKnown RBP29.21■■■□□ 2.27
VEGFA-211ENST00000476772 TTMPQ5BVD1 217 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 NSMCE3Q96MG7 304 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 SLC2A11Q9BYW1 496 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 ROPN1BQ9BZX4 212 aaPredicted RBP29.21■■■□□ 2.27
VEGFA-211ENST00000476772 CENPHQ9H3R5 247 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 ROPN1Q9HAT0 212 aaPredicted RBP29.21■■■□□ 2.27
VEGFA-211ENST00000476772 SCUBE2Q9NQ36 999 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 THG1LQ9NWX6 298 aaKnown RBP29.21■■■□□ 2.27
VEGFA-211ENST00000476772 RABGEF1Q9UJ41 708 aa29.21■■■□□ 2.27
VEGFA-211ENST00000476772 RASGRF2O14827 1237 aa29.2■■■□□ 2.26
VEGFA-211ENST00000476772 TRIM24O15164 1050 aa29.2■■■□□ 2.26
VEGFA-211ENST00000476772 ATP9BO43861 1147 aa29.2■■■□□ 2.26
VEGFA-211ENST00000476772 NFATC1O95644 943 aa29.2■■■□□ 2.26
VEGFA-211ENST00000476772 SERPINF2P08697 491 aa29.2■■■□□ 2.26
VEGFA-211ENST00000476772 RHOAP61586 193 aa29.2■■■□□ 2.26
VEGFA-211ENST00000476772 ATP2A3Q93084 1043 aa29.2■■■□□ 2.26
VEGFA-211ENST00000476772 XPO6Q96QU8 1125 aaKnown RBP29.2■■■□□ 2.26
VEGFA-211ENST00000476772 FAM83CQ9BQN1 747 aa29.2■■■□□ 2.26
VEGFA-211ENST00000476772 CCDC77Q9BR77 488 aa29.2■■■□□ 2.26
VEGFA-211ENST00000476772 EXOC1LA0A1B0GW35 172 aa29.19■■■□□ 2.26
VEGFA-211ENST00000476772 TCRBV9S1A1TA0A576 114 aa29.19■■■□□ 2.26
VEGFA-211ENST00000476772 INSIG1O15503 277 aa29.19■■■□□ 2.26
VEGFA-211ENST00000476772 SMAD6O43541 496 aaKnown RBP29.19■■■□□ 2.26
VEGFA-211ENST00000476772 LAMP2P13473 410 aa29.19■■■□□ 2.26
VEGFA-211ENST00000476772 PGAM1P18669 254 aa29.19■■■□□ 2.26
VEGFA-211ENST00000476772 SLC25A41Q8N5S1 370 aa29.19■■■□□ 2.26
VEGFA-211ENST00000476772 E2F7Q96AV8 911 aa29.19■■■□□ 2.26
VEGFA-211ENST00000476772 NUDCD1Q96RS6 583 aa29.19■■■□□ 2.26
VEGFA-211ENST00000476772 PLA2G2FQ9BZM2 168 aa29.19■■■□□ 2.26
VEGFA-211ENST00000476772 IL22Q9GZX6 179 aa29.19■■■□□ 2.26
VEGFA-211ENST00000476772 SAMD15Q9P1V8 674 aa29.19■■■□□ 2.26
VEGFA-211ENST00000476772 GOLGA8KD6RF30 607 aa29.18■■■□□ 2.26
VEGFA-211ENST00000476772 RNF40O75150 1001 aa29.18■■■□□ 2.26
VEGFA-211ENST00000476772 TCEA3O75764 348 aa29.18■■■□□ 2.26
VEGFA-211ENST00000476772 STEAP4Q687X5 459 aa29.18■■■□□ 2.26
VEGFA-211ENST00000476772 C12orf40Q86WS4 652 aa29.18■■■□□ 2.26
VEGFA-211ENST00000476772 DDX51Q8N8A6 666 aaKnown RBP eCLIP29.18■■■□□ 2.261e-7■■□□□ 13.1
VEGFA-211ENST00000476772 SMRP1Q8NCR6 262 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms