RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 SLC4A1P02730 911 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 TUBBP07437 444 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 CYP3A4P08684 503 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 PRR35P0CG20 571 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 EGR2P11161 476 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-207ENST00000476169 ATF7P17544 494 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-207ENST00000476169 ENGP17813 658 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 GABRB1P18505 474 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 SP100P23497 879 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-207ENST00000476169 AVPR2P30518 371 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 CYP2C18P33260 490 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 PTGS2P35354 604 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 MATR3P43243 847 aaKnown RBP eCLIP4.38□□□□□ -1.71
VPS13D-207ENST00000476169 DIO1P49895 249 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 ALDH3A2P51648 485 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 SLC12A2P55011 1212 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 YWHAHQ04917 246 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-207ENST00000476169 DDR1Q08345 913 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 ABHD18Q0P651 414 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 CCDC15Q0P6D6 951 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 IL13RA2Q14627 380 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 KCNB1Q14721 858 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 PTPN14Q15678 1187 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 GPR162Q16538 588 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 LETM2Q2VYF4 491 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 KRTCAP3Q53RY4 240 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 IGSF11Q5DX21 431 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 SPDYAQ5MJ70 313 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 ABHD17BQ5VST6 288 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 KIAA0930Q6ICG6 404 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-207ENST00000476169 TRAT1Q6PIZ9 186 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 RNF207Q6ZRF8 634 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 ZNF551Q7Z340 670 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-207ENST00000476169 UBE2Q1Q7Z7E8 422 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 KBTBD6Q86V97 674 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 BRSK2Q8IWQ3 736 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 TEX9Q8N6V9 391 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 IL17RCQ8NAC3 791 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 ABHD11Q8NFV4 315 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 RP9Q8TA86 221 aaKnown RBP4.38□□□□□ -1.71
VPS13D-207ENST00000476169 GRK7Q8WTQ7 553 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 HAS1Q92839 578 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 DVL3Q92997 716 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-207ENST00000476169 FAM162AQ96A26 154 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 TRMT61AQ96FX7 289 aaKnown RBP4.38□□□□□ -1.71
VPS13D-207ENST00000476169 PGAM5Q96HS1 289 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 CABS1Q96KC9 395 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 FER1L6-AS2Q96M78 137 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 PAFAH2Q99487 392 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 CLSTN3Q9BQT9 956 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 SRSF8Q9BRL6 282 aaKnown RBP4.38□□□□□ -1.71
VPS13D-207ENST00000476169 CCDC106Q9BWC9 280 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 HDHD5Q9BXW7 423 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 WDR11Q9BZH6 1224 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 ABCG4Q9H172 646 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 CDCP1Q9H5V8 836 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 CXorf56Q9H5V9 222 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 USP29Q9HBJ7 922 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 C20orf141Q9NUB4 165 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 BABAM1Q9NWV8 329 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 FBXL17Q9UF56 701 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 KLHL20Q9Y2M5 609 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 RB1CC1Q8TDY2 1594 aa4.38□□□□□ -1.71
VPS13D-207ENST00000476169 A0A1W2PQM1 296 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 CCDC69A6NI79 296 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 A6NL46 340 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 A8MZ25 164 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 SYNCRIPO60506 623 aaKnown RBP4.37□□□□□ -1.71
VPS13D-207ENST00000476169 EXOC3O60645 756 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 PAGE4O60829 102 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 TJP3O95049 919 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 CHRM4P08173 479 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 ARSAP15289 507 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 NDUFB7P17568 137 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 MATN1P21941 496 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 PTAFRP25105 342 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 GSTM2P28161 218 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 PCSK6P29122 969 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 JAK3P52333 1124 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 EVCP57679 992 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 FOXL2P58012 376 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 RAE1P78406 368 aaKnown RBP4.37□□□□□ -1.71
VPS13D-207ENST00000476169 BLOC1S1P78537 153 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 PSG6Q00889 435 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 SCN1BQ07699 218 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 NIPAL4Q0D2K0 466 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 CSTF3Q12996 717 aaKnown RBP4.37□□□□□ -1.71
VPS13D-207ENST00000476169 IKQ13123 557 aaPredicted RBP4.37□□□□□ -1.71
VPS13D-207ENST00000476169 RUNX2Q13950 521 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 TNIP1Q15025 636 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 SLC18A3Q16572 532 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 SMU1Q2TAY7 513 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 TBC1D25Q3MII6 688 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 NAPEPLDQ6IQ20 393 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 WDR53Q7Z5U6 358 aaPredicted RBP4.37□□□□□ -1.71
VPS13D-207ENST00000476169 TADA2BQ86TJ2 420 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 MCUQ8NE86 351 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 DNAAF1Q8NEP3 725 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 PROKR1Q8TCW9 393 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 UTP15Q8TED0 518 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms