RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 HS3ST3A1Q9Y663 406 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 CXorf51AA0A1B0GTR3 108 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 SIGLEC16A6NMB1 481 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 AREL1O15033 823 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 FFAR2O15552 330 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 KDELR3O43731 214 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 PIAS2O75928 621 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 NEBLO76041 1014 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 CDK4P11802 303 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 CKMT1AP12532 417 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 HNRNPA2B1P22626 353 aaKnown RBP7.14□□□□□ -1.27
HDAC3-207ENST00000475549 SDC4P31431 198 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 L1CAMP32004 1257 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 EIF2S3P41091 472 aaKnown RBP7.14□□□□□ -1.27
HDAC3-207ENST00000475549 STAT1P42224 750 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 NEK3P51956 506 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 COPB1P53618 953 aaKnown RBP7.14□□□□□ -1.27
HDAC3-207ENST00000475549 GSCP56915 257 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-207ENST00000475549 RPS21P63220 83 aaKnown RBP7.14□□□□□ -1.27
HDAC3-207ENST00000475549 OGDHQ02218 1023 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 ILKQ13418 452 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 RTP5Q14D33 572 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 SYCP1Q15431 976 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 CLEC16AQ2KHT3 1053 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 MYLK3Q32MK0 819 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 LRRC73Q5JTD7 316 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 PPP1R15BQ5SWA1 713 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 ATXN7L2Q5T6C5 722 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-207ENST00000475549 NYAP1Q6ZVC0 841 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 MON1BQ7L1V2 547 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 STRADAQ7RTN6 431 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 OXR1Q8N573 874 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 DCBLD1Q8N8Z6 715 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 OR4C6Q8NH72 309 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 FAM172AQ8WUF8 416 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 FUBP1Q96AE4 644 aaKnown RBP7.14□□□□□ -1.27
HDAC3-207ENST00000475549 ISG20Q96AZ6 181 aaKnown RBP7.14□□□□□ -1.27
HDAC3-207ENST00000475549 CENPTQ96BT3 561 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 MS4A3Q96HJ5 214 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 FEM1CQ96JP0 617 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 SYT11Q9BT88 431 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 CALN1Q9BXU9 219 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 ZDHHC6Q9H6R6 413 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 TMEM51Q9NW97 253 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 TAS2R14Q9NYV8 317 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 ADAM22Q9P0K1 906 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 LIMA1Q9UHB6 759 aaKnown RBP7.14□□□□□ -1.27
HDAC3-207ENST00000475549 RAI2Q9Y5P3 530 aa7.14□□□□□ -1.27
HDAC3-207ENST00000475549 SPTY2D1-AS1A0A0U1RR47 76 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 LGALS16A8MUM7 142 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 K7ESM1 405 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 KRIT1O00522 736 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 SCAMP1O15126 338 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 INSIG1O15503 277 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 CCP110O43303 1012 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 AP1G1O43747 822 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 MAGEC1O60732 1142 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 GCATO75600 419 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 POP4O95707 220 aaKnown RBP7.13□□□□□ -1.27
HDAC3-207ENST00000475549 CSF2P04141 144 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 ATP1A3P13637 1013 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 NME1P15531 152 aaKnown RBP7.13□□□□□ -1.27
HDAC3-207ENST00000475549 TIMP2P16035 220 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 GPD1P21695 349 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 AKT2P31751 481 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 RECQLP46063 649 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-207ENST00000475549 NSFP46459 744 aaKnown RBP7.13□□□□□ -1.27
HDAC3-207ENST00000475549 MAPKAPK2P49137 400 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 ZNF143P52747 638 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-207ENST00000475549 PFN3P60673 137 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 SEMG2Q02383 582 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 UBXN1Q04323 297 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 CCDC15Q0P6D6 951 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 EIF2B5Q13144 721 aaKnown RBP7.13□□□□□ -1.27
HDAC3-207ENST00000475549 POLD3Q15054 466 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-207ENST00000475549 CYTH1Q15438 398 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 ARL13BQ3SXY8 428 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 ZNF805Q5CZA5 627 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 FKBP15Q5T1M5 1219 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 CDCP2Q5VXM1 449 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 KIAA1161Q6NSJ0 714 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 TRIM72Q6ZMU5 477 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 TMC6Q7Z403 805 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 IRF2BP2Q7Z5L9 587 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 SLFN11Q7Z7L1 901 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 DNAAF5Q86Y56 855 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 CACTIN-AS1Q8N1I8 211 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 RYBPQ8N488 228 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-207ENST00000475549 RTL3Q8N8U3 475 aaKnown RBP7.13□□□□□ -1.27
HDAC3-207ENST00000475549 MSANTD4Q8NCY6 345 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 C3orf20Q8ND61 904 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 OR2AP1Q8NGE2 309 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 NTAN1Q96AB6 310 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 TBC1D31Q96DN5 1066 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 HMCESQ96FZ2 354 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 PPP1R16AQ96I34 528 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 APOLD1Q96LR9 279 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 CCDC114Q96M63 670 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 NSMCE3Q96MG7 304 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 KLHL32Q96NJ5 620 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms