RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 INO80DQ53TQ3 878 aaPredicted RBP6.75□□□□□ -1.33
SMC5-203ENST00000475540 IL20RBQ6UXL0 311 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 ZMIZ2Q8NF64 920 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 TBC1D22AQ8WUA7 517 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 RIC8AQ9NPQ8 531 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 SELENONQ9NZV5 590 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 EVPLQ92817 2033 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 ITM2AO43736 263 aa6.74□□□□□ -1.33
SMC5-203ENST00000475540 PRSS2P07478 247 aa6.74□□□□□ -1.33
SMC5-203ENST00000475540 THPOP40225 353 aa6.74□□□□□ -1.33
SMC5-203ENST00000475540 ARSFP54793 590 aa6.74□□□□□ -1.33
SMC5-203ENST00000475540 TRAF2Q12933 501 aa6.74□□□□□ -1.33
SMC5-203ENST00000475540 ME3Q16798 604 aa6.74□□□□□ -1.33
SMC5-203ENST00000475540 ZNF284Q2VY69 593 aa6.74□□□□□ -1.33
SMC5-203ENST00000475540 TDRD12Q587J7 1177 aaKnown RBP6.74□□□□□ -1.33
SMC5-203ENST00000475540 PRSS45Q7RTY3 260 aa6.74□□□□□ -1.33
SMC5-203ENST00000475540 SPATA2LQ8IUW3 424 aaPredicted RBP6.74□□□□□ -1.33
SMC5-203ENST00000475540 CNOT9Q92600 299 aaKnown RBP6.74□□□□□ -1.33
SMC5-203ENST00000475540 PHF21BQ96EK2 531 aa6.74□□□□□ -1.33
SMC5-203ENST00000475540 MEIS3Q99687 375 aa6.74□□□□□ -1.33
SMC5-203ENST00000475540 TAOK3Q9H2K8 898 aa6.74□□□□□ -1.33
SMC5-203ENST00000475540 WDR6Q9NNW5 1121 aaKnown RBP6.74□□□□□ -1.33
SMC5-203ENST00000475540 CKAP5Q14008 2032 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 SLC25A17O43808 307 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 CKMT1AP12532 417 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 CCT5P48643 541 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 NUDT6P53370 316 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 HNF4GQ14541 408 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 NAA25Q14CX7 972 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 TAF12Q16514 161 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 EDRF1Q3B7T1 1238 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 WDR45BQ5MNZ6 344 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 MAP3K21Q5TCX8 1036 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 PATL1Q86TB9 770 aaKnown RBP6.73□□□□□ -1.33
SMC5-203ENST00000475540 CHD1LQ86WJ1 897 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 ADHFE1Q8IWW8 467 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 MIGA1Q8NAN2 632 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 OR14A16Q8NHC5 309 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 MED30Q96HR3 178 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 NPFFR1Q9GZQ6 430 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 MVB12BQ9H7P6 319 aa6.73□□□□□ -1.33
SMC5-203ENST00000475540 IFT80Q9P2H3 777 aaPredicted RBP6.73□□□□□ -1.33
SMC5-203ENST00000475540 FAM90A7PA6NKC0 464 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 FAM90A22PA8MWA6 464 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 FAM90A12PA8MX19 464 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 FAM90A23PA8MXZ1 464 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 CHL1O00533 1208 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 TGFB3P10600 412 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 TNFRSF8P28908 595 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 PPM1FP49593 454 aaPredicted RBP6.72□□□□□ -1.33
SMC5-203ENST00000475540 UBE3AQ05086 875 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 ZRSR2Q15696 482 aaKnown RBP6.72□□□□□ -1.33
SMC5-203ENST00000475540 ZNF585BQ52M93 769 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 MCPH1Q8NEM0 835 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 NUDCD2Q8WVJ2 157 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 GCC1Q96CN9 775 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 RNF183Q96D59 192 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMC5-203ENST00000475540 MROH8Q9H579 483 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 WWOXQ9NZC7 414 aa6.72□□□□□ -1.33
SMC5-203ENST00000475540 KDM4EB2RXH2 506 aaPredicted RBP6.71□□□□□ -1.34
SMC5-203ENST00000475540 EIF3FO00303 357 aaPredicted RBP6.71□□□□□ -1.34
SMC5-203ENST00000475540 SOX30O94993 753 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 CENPAP49450 140 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 SLC18A2Q05940 514 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 DCAF6Q58WW2 860 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 ATG16L1Q676U5 607 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 BBS12Q6ZW61 710 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 CPXM2Q8N436 756 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 GDPD5Q8WTR4 605 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 RAB40AQ8WXH6 277 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 ADAMTS14Q8WXS8 1223 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 CLSTN3Q9BQT9 956 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 LMAN2LQ9H0V9 348 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 DGKBQ9Y6T7 804 aa6.71□□□□□ -1.34
SMC5-203ENST00000475540 C17orf113A0A1B0GUU1 675 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 ARHGAP10A1A4S6 786 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 GTPBP1O00178 669 aaKnown RBP6.7□□□□□ -1.34
SMC5-203ENST00000475540 PER2O15055 1255 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 CEP104O60308 925 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 CBSLP0DN79 551 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 CTPS1P17812 591 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 CBSP35520 551 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 LIFRP42702 1097 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 AMTP48728 403 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 CAPSQ13938 189 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 DHX8Q14562 1220 aaKnown RBP6.7□□□□□ -1.34
SMC5-203ENST00000475540 LPIN1Q14693 890 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 PLEKHO1Q53GL0 409 aaPredicted RBP6.7□□□□□ -1.34
SMC5-203ENST00000475540 CRELD2Q6UXH1 353 aaPredicted RBP6.7□□□□□ -1.34
SMC5-203ENST00000475540 ADGRG6Q86SQ4 1221 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 NOC3LQ8WTT2 800 aaKnown RBP6.7□□□□□ -1.34
SMC5-203ENST00000475540 TMEM170AQ8WVE7 144 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 CDT1Q9H211 546 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 SLC32A1Q9H598 525 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 EPHX3Q9H6B9 360 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 SPATS2LQ9NUQ6 558 aaKnown RBP6.7□□□□□ -1.34
SMC5-203ENST00000475540 PCDHGB5Q9Y5G0 923 aa6.7□□□□□ -1.34
SMC5-203ENST00000475540 C4orf47A7E2U8 309 aa6.69□□□□□ -1.34
SMC5-203ENST00000475540 DSCR9P59020 149 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms