RNA–Protein interactions for RNA: ENST00000474707.1

RABGAP1-208, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-208ENST00000474707 IFT27Q9BW83 186 aa3.13□□□□□ -1.91
RABGAP1-208ENST00000474707 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.13□□□□□ -1.91
RABGAP1-208ENST00000474707 SLC22A11Q9NSA0 550 aa3.13□□□□□ -1.91
RABGAP1-208ENST00000474707 SLC25A13Q9UJS0 675 aa3.13□□□□□ -1.91
RABGAP1-208ENST00000474707 LZTS1Q9Y250 596 aa3.13□□□□□ -1.91
RABGAP1-208ENST00000474707 ZNF711Q9Y462 761 aa3.13□□□□□ -1.91
RABGAP1-208ENST00000474707 NCAPD3P42695 1498 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 AGAP5A6NIR3 686 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 GAGE7O76087 117 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 GAGE12FP0CL80 117 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 GAGE12GP0CL81 117 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 GAGE12IP0CL82 117 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 SLC5A1P13866 664 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 ZNF10P21506 573 aaPredicted RBP3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 PRIM2P49643 509 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 RCAN1P53805 252 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 LMO4P61968 165 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 SF3A3Q12874 501 aaKnown RBP eCLIP3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 GAGE1Q13065 139 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 GAGE4Q13068 117 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 TBC1D9BQ66K14 1250 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 RINT1Q6NUQ1 792 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 ARHGAP11AQ6P4F7 1023 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 FBXO38Q6PIJ6 1188 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 C14orf80Q86SX3 495 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 ANKRD13AQ8IZ07 590 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 GRAPLQ8TC17 118 aaPredicted RBP3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 LITAFQ99732 161 aa3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 MOV10L1Q9BXT6 1211 aaKnown RBP3.12□□□□□ -1.91
RABGAP1-208ENST00000474707 A0A1W2PNU3 283 aaPredicted RBP3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 J3KR12 359 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 CHL1O00533 1208 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 PPM1GO15355 546 aaPredicted RBP3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 CRLF1O75462 422 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 VNN2O95498 520 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 LINC00271P0C7V0 271 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 HARSP12081 509 aaKnown RBP3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 ATF3P18847 181 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 GSTM2P28161 218 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 DPP6P42658 865 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 HSD17B4P51659 736 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 FUT6P51993 359 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 BRWD1-AS2P59051 145 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 PMS2P11Q13670 270 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 SYT16Q17RD7 645 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 SLC35G1Q2M3R5 365 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 NCAPH2Q6IBW4 605 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 KLHL24Q6TFL4 600 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 SUSD1Q6UWL2 747 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 TMC8Q8IU68 726 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 VPS52Q8N1B4 723 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 OR1N1Q8NGS0 311 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 C2CD4CQ8TF44 421 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 EGFL8Q99944 293 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 DDX23Q9BUQ8 820 aaKnown RBP3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 LRRC4Q9HBW1 653 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 ZNF224Q9NZL3 707 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 SMARCA2P51531 1590 aa3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 THOC2Q8NI27 1593 aaKnown RBP3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 GREB1LQ9C091 1923 aaPredicted RBP3.11□□□□□ -1.91
RABGAP1-208ENST00000474707 IGKV6D-41A0A0C4DH26 115 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 CPED1A4D0V7 1026 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 NPIPB13A6NJU9 1138 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 NPIPB5A8MRT5 1133 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 NPIPB4C9JG80 1138 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 C16orf97H3BN30 126 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 GRM8O00222 908 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 LARGE1O95461 756 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 CLDN14O95500 239 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 MCM3P25205 808 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 AKT1P31749 480 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 ALDH18A1P54886 795 aaKnown RBP3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 KRTAP10-1P60331 282 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 ECT2LQ008S8 904 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 PPIGQ13427 754 aaKnown RBP eCLIP3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 RAB30Q15771 203 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 ZC2HC1BQ5TFG8 222 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 TMEM268Q5VZI3 342 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 HIBCHQ6NVY1 386 aaPredicted RBP3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 CCDC129Q6ZRS4 1044 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 NRSN1Q8IZ57 195 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 OR13A1Q8NGR1 328 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 FIG4Q92562 907 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 TSR2Q969E8 191 aaKnown RBP3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 TEFMQ96QE5 360 aaKnown RBP3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 F2RL3Q96RI0 385 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 TRIM31Q9BZY9 425 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 PDE11AQ9HCR9 933 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 STARD7Q9NQZ5 370 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 HERC5Q9UII4 1024 aaKnown RBP3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 PDS5BQ9NTI5 1447 aa3.1□□□□□ -1.91
RABGAP1-208ENST00000474707 BAZ1AQ9NRL2 1556 aaPredicted RBP3.09□□□□□ -1.91
RABGAP1-208ENST00000474707 RIMBP3CA6NJZ7 1639 aa3.09□□□□□ -1.91
RABGAP1-208ENST00000474707 RIMBP3BA6NNM3 1639 aa3.09□□□□□ -1.91
RABGAP1-208ENST00000474707 RIMBP3Q9UFD9 1639 aa3.09□□□□□ -1.91
RABGAP1-208ENST00000474707 NPPBP16860 134 aa3.09□□□□□ -1.91
RABGAP1-208ENST00000474707 LIFRP42702 1097 aa3.09□□□□□ -1.91
RABGAP1-208ENST00000474707 KRTAP12-2P59991 146 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms