RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 ADAT2Q7Z6V5 191 aaKnown RBP18.39■□□□□ 0.53
SNRPB-203ENST00000474384 SRLQ86TD4 932 aa18.39■□□□□ 0.53
SNRPB-203ENST00000474384 SLC13A5Q86YT5 568 aaPredicted RBP18.39■□□□□ 0.53
SNRPB-203ENST00000474384 BBS5Q8N3I7 341 aa18.39■□□□□ 0.53
SNRPB-203ENST00000474384 FAM160A2Q8N612 972 aaPredicted RBP18.39■□□□□ 0.53
SNRPB-203ENST00000474384 TMIEQ8NEW7 156 aa18.39■□□□□ 0.53
SNRPB-203ENST00000474384 TFB1MQ8WVM0 346 aaKnown RBP18.39■□□□□ 0.53
SNRPB-203ENST00000474384 ATOH1Q92858 354 aaPredicted RBP18.39■□□□□ 0.53
SNRPB-203ENST00000474384 VOPP1Q96AW1 172 aa18.39■□□□□ 0.53
SNRPB-203ENST00000474384 ZNF419Q96HQ0 510 aaPredicted RBP18.39■□□□□ 0.53
SNRPB-203ENST00000474384 PABPC3Q9H361 631 aaKnown RBP18.39■□□□□ 0.53
SNRPB-203ENST00000474384 NT5MQ9NPB1 228 aa18.39■□□□□ 0.53
SNRPB-203ENST00000474384 RBM22Q9NW64 420 aaKnown RBP eCLIP18.39■□□□□ 0.532e-11■□□□□ 8.1
SNRPB-203ENST00000474384 SEPT10Q9P0V9 454 aa18.39■□□□□ 0.53
SNRPB-203ENST00000474384 RAPGEFL1Q9UHV5 662 aa18.39■□□□□ 0.53
SNRPB-203ENST00000474384 SCML1Q9UN30 329 aa18.39■□□□□ 0.53
SNRPB-203ENST00000474384 CYP8B1Q9UNU6 501 aa18.39■□□□□ 0.53
SNRPB-203ENST00000474384 PCDHGA2Q9Y5H1 932 aa18.39■□□□□ 0.53
SNRPB-203ENST00000474384 R4GN57 208 aa18.39■□□□□ 0.53
SNRPB-203ENST00000474384 C1QTNF3-AMACRE9PGA6 284 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 H7C0C1 242 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 KPNA3O00505 521 aaPredicted RBP18.38■□□□□ 0.53
SNRPB-203ENST00000474384 CEP104O60308 925 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 ZNF217O75362 1048 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 GJB3O75712 270 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 C5AR1P21730 350 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 P2RY2P41231 377 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 ATP5OP48047 213 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 SCNN1BP51168 640 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 MAXP61244 160 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 RAD51Q06609 339 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 NSUN2Q08J23 767 aaKnown RBP eCLIP18.38■□□□□ 0.53
SNRPB-203ENST00000474384 XRCC4Q13426 336 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 TTC31Q49AM3 519 aaPredicted RBP18.38■□□□□ 0.53
SNRPB-203ENST00000474384 FAM46CQ5VWP2 391 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 FAM124AQ86V42 546 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 HDDC3Q8N4P3 179 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 AADATQ8N5Z0 425 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 GANCQ8TET4 914 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 TRIM44Q96DX7 344 aaPredicted RBP18.38■□□□□ 0.53
SNRPB-203ENST00000474384 WDR24Q96S15 920 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 CEP41Q9BYV8 373 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 C10orf88Q9H8K7 445 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 FBXL12Q9NXK8 326 aa18.38■□□□□ 0.53
SNRPB-203ENST00000474384 USP36Q9P275 1121 aaKnown RBP18.38■□□□□ 0.53
SNRPB-203ENST00000474384 R3HDM2Q9Y2K5 976 aaKnown RBP18.38■□□□□ 0.53
SNRPB-203ENST00000474384 VPS13AQ96RL7 3174 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 A0A1W2PP55 124 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 PLK4O00444 970 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 LILRB5O75023 590 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 RNASEH2AO75792 299 aaKnown RBP18.37■□□□□ 0.53
SNRPB-203ENST00000474384 RPP40O75818 363 aaKnown RBP18.37■□□□□ 0.53
SNRPB-203ENST00000474384 NEBLO76041 1014 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 CNR2P34972 360 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 HSPA9P38646 679 aaKnown RBP18.37■□□□□ 0.53
SNRPB-203ENST00000474384 CSNK1DP48730 415 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 EIF3EP60228 445 aaKnown RBP18.37■□□□□ 0.53
SNRPB-203ENST00000474384 IFI35P80217 286 aaPredicted RBP18.37■□□□□ 0.53
SNRPB-203ENST00000474384 ITKQ08881 620 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 ZBTB17Q13105 803 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 BYSLQ13895 437 aaKnown RBP18.37■□□□□ 0.53
SNRPB-203ENST00000474384 HS1BP3Q53T59 392 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 TTC13Q8NBP0 860 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 GAB3Q8WWW8 586 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 ARRDC3Q96B67 414 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 LRIG1Q96JA1 1093 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 QKIQ96PU8 341 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNRPB-203ENST00000474384 IL12RB2Q99665 862 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 OMDQ99983 421 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 MGME1Q9BQP7 344 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 IRF2BPLQ9H1B7 796 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 SERGEFQ9UGK8 458 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 NCKAP1Q9Y2A7 1128 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 TTLL3Q9Y4R7 772 aa18.37■□□□□ 0.53
SNRPB-203ENST00000474384 IGHV1OR15-9A0A0B4J2B8 117 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 HACD1B0YJ81 288 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 FGGP02679 453 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 HLA-DQB2P05538 268 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 UGT2B4P06133 528 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 RBP3P10745 1247 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 BCKDHBP21953 392 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 DRD3P35462 400 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 CNTN1Q12860 1018 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 SLC45A4Q5BKX6 768 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 GDPD4Q6W3E5 623 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 MUC6Q6W4X9 2439 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.36■□□□□ 0.53
SNRPB-203ENST00000474384 USP30Q70CQ3 517 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.36■□□□□ 0.533e-6■■■■□ 21.7
SNRPB-203ENST00000474384 CNTD1Q8N815 330 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 HTR3CQ8WXA8 447 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 PBKQ96KB5 322 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 SPACA7Q96KW9 195 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 NSMCE3Q96MG7 304 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 KLHL32Q96NJ5 620 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 CPEB1Q9BZB8 566 aaKnown RBP18.36■□□□□ 0.53
SNRPB-203ENST00000474384 NEUROG2Q9H2A3 272 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 FAM86C1Q9NVL1 165 aa18.36■□□□□ 0.53
SNRPB-203ENST00000474384 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.36■□□□□ 0.53
SNRPB-203ENST00000474384 MBD1Q9UIS9 605 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms