RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CKMT2P17540 419 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 CLDN2P57739 230 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 SNRPD1P62314 119 aaKnown RBP15.55■□□□□ 0.08
VTI1A-203ENST00000472892 RPL7AP62424 266 aaKnown RBP15.55■□□□□ 0.08
VTI1A-203ENST00000472892 ILKQ13418 452 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 FGL2Q14314 439 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 PROX2Q3B8N5 592 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 ZNF805Q5CZA5 627 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 ACAD10Q6JQN1 1059 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 GCNT7Q6ZNI0 430 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 ZSCAN30Q86W11 494 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 DCP2Q8IU60 420 aaKnown RBP15.55■□□□□ 0.08
VTI1A-203ENST00000472892 MCOLN2Q8IZK6 566 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 PYROXD2Q8N2H3 581 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 RTL3Q8N8U3 475 aaKnown RBP15.55■□□□□ 0.08
VTI1A-203ENST00000472892 OR13H1Q8NG92 308 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 OR2AP1Q8NGE2 309 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 RAB7BQ96AH8 199 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 IFT43Q96FT9 208 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 TM6SF2Q9BZW4 377 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 NOL6Q9H6R4 1146 aaKnown RBP15.55■□□□□ 0.08
VTI1A-203ENST00000472892 ZDHHC6Q9H6R6 413 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 GPR27Q9NS67 375 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 GPSM3Q9Y4H4 160 aa15.55■□□□□ 0.08
VTI1A-203ENST00000472892 C16orf96A6NNT2 1141 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 TRIM38O00635 465 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 TSPAN6O43657 245 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 JUPP14923 745 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 DGKAP23743 735 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 ACP1P24666 158 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 EPHB2P29323 1055 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 GKP32189 559 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 AIF1P55008 147 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 TYRO3Q06418 890 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 CYP4F3Q08477 520 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 ZNF211Q13398 564 aaPredicted RBP15.54■□□□□ 0.08
VTI1A-203ENST00000472892 MYLK3Q32MK0 819 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 INO80DQ53TQ3 878 aaPredicted RBP15.54■□□□□ 0.08
VTI1A-203ENST00000472892 EFHC2Q5JST6 749 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 DNAJC24Q6P3W2 148 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 SCYL2Q6P3W7 929 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 LEKR1Q6ZMV7 388 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 Q6ZSR6 202 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 PARS2Q7L3T8 475 aaKnown RBP15.54■□□□□ 0.08
VTI1A-203ENST00000472892 SLC22A18ASQ8N1D0 253 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 RYBPQ8N488 228 aaPredicted RBP15.54■□□□□ 0.08
VTI1A-203ENST00000472892 CASKIN2Q8WXE0 1202 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 ASB12Q8WXK4 309 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 MS4A3Q96HJ5 214 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 VCPIP1Q96JH7 1222 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 MCEEQ96PE7 176 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 LENG8Q96PV6 779 aaPredicted RBP15.54■□□□□ 0.08
VTI1A-203ENST00000472892 CNPY3Q9BT09 278 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 SYT11Q9BT88 431 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 C1QTNF2Q9BXJ5 285 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 FZD10Q9ULW2 581 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 MYO6Q9UM54 1294 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 DSPP15924 2871 aaKnown RBP15.54■□□□□ 0.08
VTI1A-203ENST00000472892 CHD5Q8TDI0 1954 aa15.54■□□□□ 0.08
VTI1A-203ENST00000472892 ANKRD11Q6UB99 2663 aaPredicted RBP15.53■□□□□ 0.08
VTI1A-203ENST00000472892 FAM208BQ5VWN6 2430 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 ANKRD62A6NC57 917 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 ZSCAN5CA6NGD5 496 aaPredicted RBP15.53■□□□□ 0.08
VTI1A-203ENST00000472892 A6NNZ2 444 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 WASH4PA8MWX3 477 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 KRIT1O00522 736 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 RAD51BO15315 384 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 TEX33O43247 280 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 BUB1O43683 1085 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 SIGLEC6O43699 453 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 YBEYP58557 167 aaPredicted RBP15.53■□□□□ 0.08
VTI1A-203ENST00000472892 CACTIN-AS1Q8N1I8 211 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 AOPEPQ8N6M6 819 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 OR6K2Q8NGY2 324 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 BAP1Q92560 729 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 KLF6Q99612 283 aaPredicted RBP15.53■□□□□ 0.08
VTI1A-203ENST00000472892 BPIFA3Q9BQP9 254 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 CALN1Q9BXU9 219 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 OSBPL1AQ9BXW6 950 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 NAT10Q9H0A0 1025 aaKnown RBP15.53■□□□□ 0.08
VTI1A-203ENST00000472892 RTN4Q9NQC3 1192 aaKnown RBP15.53■□□□□ 0.08
VTI1A-203ENST00000472892 UCKL1Q9NWZ5 548 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 LHX6Q9UPM6 363 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 RAXQ9Y2V3 346 aa15.53■□□□□ 0.08
VTI1A-203ENST00000472892 ARID1BQ8NFD5 2236 aaPredicted RBP15.53■□□□□ 0.08
VTI1A-203ENST00000472892 POM121BA6NF01 834 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 IGLON5A6NGN9 336 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 AREL1O15033 823 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 CREB3O43889 395 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 PIAS2O75928 621 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 GIMD1P0DJR0 217 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 TNFAIP3P21580 790 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 HNF1BP35680 557 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 ABL2P42684 1182 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 OGDHQ02218 1023 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 SGCGQ13326 291 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 ATXN7L2Q5T6C5 722 aaPredicted RBP15.52■□□□□ 0.08
VTI1A-203ENST00000472892 PPP1R2P3Q6NXS1 205 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 DCUN1D2Q6PH85 259 aa15.52■□□□□ 0.08
VTI1A-203ENST00000472892 KYAT3Q6YP21 454 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms